CI01000029_08915550_08920146


Basic Information

Item Value
gene id CI01000029_08915550_08920146
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8914423 ~ 8920358 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08915550_08920146.mRNA
GTTTAAAACAGCAGCAGGAGGAACCAGTGACATTCAGACTTTACTTTACATTTCATATTCCTGAAACAGCATTTATACAGCCCTGATTTACATCAGTCTGAAACATGTGAGAAACCAGCCAGTCTCAAATCCGTTCCATGACATTTTATGCATTATCACACTCTCTTTTCAACATGAAACAATGTTTACAAATCATTTCTGATTTCATGATCTGACATGGTAACCAAACAGTTTGAGTCATAGCATCATTGACATAATATTATAGTTTTTGTCAATATTTTACGAGAAGAGACAAGAAGATATGAGAAGAGACGAGATAAGAAGAGACGAGAAGGGATGTAAAGAGATGAGAAAACATAAGAAGATATGAGACGAAAAGATATGAGAAGATACGAGAAGAGATGAGACGAGATGAGAAGATACAAGAAGAGAAAAGAGAAGATATAAGAACAGAAGATATGAGAAGATACAAGAAAAGAAGATACGAGAAGAAAAGAGAGAAGATACAAGAAGAGAAAAATAATATGAGAAGAGACGAGAAGAGAAGAGAAGATATGAGAAGATATGAGACAAGAACATACGAGAAGAGACAAGATGAGCTGGTACAAGAAGAGGAGATATGAGAAGATAGGAGACTAGAAAAAACAAGACAAGAAGATACAAGAAGAGAAGATATGAGAAGAGACAAGACGAGAAGATATGAGAAGATATGAGAAGATATGAGACGAGAAGAGAGGAGAAGATACAAGAAGAGAAGAGATGATACAAGAAGATACGAGAAGAAAAGGTATGAGGCAAGATGAGATGATATGAGAAGATACAAGAAGAGAAGATATGAGAAGAGACGAGACGAGATAATACAAGAGATGAGACGAGATGAGAGAAGAGATGAGAATAGAAGATATGAGAAGATACGAGATGAGAAGAGACATGAAGAGAAGATATGAGAAGAGAAGATATCTGAGCAAAGAAGATATGAGATGATACGAGAAGAGAAGATATGAGACGAGATGAGATGATATGAGAAGATACAAGAAGAGAAGATATGAGAAGAGACAAGACGAGATGAGATAATACAAGAAGAGATGAGAAGAGAAGATATGAGACGATACGAGACGAGAAGAGACATGAAGAGAAGATACAAGAAAAGAAGACTCCAGTTCAGAGTGCAAACACAATCCCAGCATTCTGCTCCACATTTTTCCAAGTCTACCTGGACTTGTGAAATGGAAACAGTGGTAATACCGTCCACCCTGATGTCTCTGGATCTTCGCGATGTGAAGGGTTTCATTGAATACGCTGGAGTCCTGGAACCGGTCCGAAACGCTGCCTGCAGTCTTGGTCCATCGAATCTACATGAGAAAGAAAAACAACTTAAATCTCTAATCGCACCATTTCACCCGTTACTCACCATTCAAAACTTCAACACAACTATGCTAAGGCGTTGTGTATTCTGCGGAGTCGAGAGGAGTGACAAGGTGAACCACATGCTGCCATTCGCTTTATTCCAGCATCATGTCCCAGACGAAACGGAGATTAACTGTCGTGTTCCTGTAGGAGCAAGGGGAGGATCGTATGGGGATTGAACGTCCCAGTCATGGGATCTTGGGAAAGTCGTGACATGTAGAAGGAGGGCCTGTTTTTGTCAGTCTGTGCGCTTCAGGATGCCCAACACATTACTCCTATAAATTTAACCTCTTGTTTATAGACAGTTCAAGATCAATAATCATACAAACAAAGCATTGATGCATTAACATTTATCACAATTCATAACTCAAGTATCAGGTATCTTTTTTTA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08915550_08920146.mRNA True 1798 mRNA 0.39 4 8914423 8920358

Neighbor

gene id symbol gene type direction distance location
CI01000029_08759743_08761002 GM2581, RPS29, RPS29.S, GM7618, GM7079 coding upstream 153229 8759696 ~ 8761326 (+)
CI01000029_08743604_08749941 WDR20 coding upstream 164086 8740734 ~ 8750337 (+)
CI01000029_08654610_08655443 NA coding upstream 257873 8652582 ~ 8656550 (+)
CI01000029_08578097_08583564 SLC25A47A coding upstream 330450 8577815 ~ 8583973 (+)
CI01000029_08558693_08564749 MYH6, MYH7, MYH6.S coding upstream 349427 8558263 ~ 8564996 (+)
CI01000029_08990637_09003719 NA coding downstream 70199 8990557 ~ 9003779 (+)
CI01000029_09058596_09061088 FKBP3 coding downstream 138238 9058596 ~ 9061323 (+)
CI01000029_09079841_09080368 ARF6.S, ARF6.2, ARF6, ARF6.2.L, ARF6B, ARF6A coding downstream 158635 9078993 ~ 9080635 (+)
CI01000029_09091229_09095666 PELI2 coding downstream 170745 9091103 ~ 9101802 (+)
CI01000029_09132920_09139682 ACTR10 coding downstream 212212 9132570 ~ 9140319 (+)
G155980 NA non-coding upstream 33632 8880448 ~ 8880791 (+)
G155965 NA non-coding upstream 63831 8850127 ~ 8850592 (+)
G155953 NA non-coding upstream 76531 8823968 ~ 8837892 (+)
G155959 NA non-coding upstream 79794 8833535 ~ 8834629 (+)
G155948 NA non-coding upstream 103489 8810608 ~ 8810934 (+)
G156010 NA non-coding downstream 140273 9060631 ~ 9067203 (+)
G156007 NA non-coding downstream 142380 8964818 ~ 9064541 (+)
G156087 NA non-coding downstream 196274 9116632 ~ 9116923 (+)
G156043 NA non-coding downstream 197358 9117716 ~ 9118633 (+)
G155627 NA other upstream 982246 7931480 ~ 7932177 (+)
G155522 NA other upstream 1276589 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2006991 6905834 ~ 6908633 (+)
G155083 NA other upstream 2424129 6431535 ~ 6490294 (+)
G155079 NA other upstream 2626025 6282685 ~ 6288398 (+)

Expression


Co-expression Network