CI01000029_08990637_09003719


Basic Information

Item Value
gene id CI01000029_08990637_09003719
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8990557 ~ 9003779 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_08990637_09003719.mRNA
GTATAAATGCAAAACGTTACCATCAGCTCTATTCAAATCAACAGAGGCGTGTCATCAGCGCGGGAAACAATGTGTCTAAAATGATCTGCTCTACCCGAGAGAGACTGATGAGAGACTTAATGACGAGCTTTTCCACACGAGCTTTATCACGGATCCATCAGAGGCAGAACTGGGATCTCATGTTCTACACGTGGAGTTCACGAGCTTCATCATATCCGTATCCCACGAGAAACAACATGGGAATCAATGCAAAGCCCCGTGTGTGCCGGTTCACAGCTGCGCTGTTTGATGGAGAAGCTCTGATGGCAGCAGTGCGTCACGTGGACGTTCGTTCGGGATTAACTGATCTTCGTGAAACCGCATCAGACCTCCAGCACTCTGAACGGGAAATATACATACACATGCTTCATTCTCCTGCTGGAAAGATGTTAATAACACATACTGCTCATTTAAATATCCTTGTTGTTTTGTCTGCTCCATAAATCAGCACAGTGGTGAGTAATGAAAGTTTGGAACAGTGTTGTTATTATCGCTAACAAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_08990637_09003719.mRNA True 542 mRNA 0.45 2 8990557 9003779

Neighbor

gene id symbol gene type direction distance location
CI01000029_08915550_08920146 NA coding upstream 70199 8914423 ~ 8920358 (+)
CI01000029_08759743_08761002 GM2581, RPS29, RPS29.S, GM7618, GM7079 coding upstream 229363 8759696 ~ 8761326 (+)
CI01000029_08743604_08749941 WDR20 coding upstream 240220 8740734 ~ 8750337 (+)
CI01000029_08654610_08655443 NA coding upstream 334007 8652582 ~ 8656550 (+)
CI01000029_08578097_08583564 SLC25A47A coding upstream 406584 8577815 ~ 8583973 (+)
CI01000029_09058596_09061088 FKBP3 coding downstream 54817 9058596 ~ 9061323 (+)
CI01000029_09079841_09080368 ARF6.S, ARF6.2, ARF6, ARF6.2.L, ARF6B, ARF6A coding downstream 75214 9078993 ~ 9080635 (+)
CI01000029_09091229_09095666 PELI2 coding downstream 87324 9091103 ~ 9101802 (+)
CI01000029_09132920_09139682 ACTR10 coding downstream 128791 9132570 ~ 9140319 (+)
CI01000029_09142383_09143514 NA coding downstream 138552 9142331 ~ 9143528 (+)
G155980 NA non-coding upstream 109766 8880448 ~ 8880791 (+)
G155965 NA non-coding upstream 139965 8850127 ~ 8850592 (+)
G155953 NA non-coding upstream 152665 8823968 ~ 8837892 (+)
G155959 NA non-coding upstream 155928 8833535 ~ 8834629 (+)
G155948 NA non-coding upstream 179623 8810608 ~ 8810934 (+)
G156010 NA non-coding downstream 56852 9060631 ~ 9067203 (+)
G156007 NA non-coding downstream 58959 8964818 ~ 9064541 (+)
G156087 NA non-coding downstream 112853 9116632 ~ 9116923 (+)
G156043 NA non-coding downstream 113937 9117716 ~ 9118633 (+)
G155627 NA other upstream 1058380 7931480 ~ 7932177 (+)
G155522 NA other upstream 1352723 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2083125 6905834 ~ 6908633 (+)
G155083 NA other upstream 2500263 6431535 ~ 6490294 (+)
G155079 NA other upstream 2702159 6282685 ~ 6288398 (+)

Expression


Co-expression Network