CI01000029_09146276_09147817


Basic Information

Item Value
gene id CI01000029_09146276_09147817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9146224 ~ 9147831 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09146276_09147817.mRNA
GTACAAAAAGACCAAAGAGCAGCATCTCAACAGTGTGACTTGCTTTTGAATAATGGAAGGAAGTTGGTGTGTTGTTCAGTTTCTGGCACTTTGTGTGTGGTTTTGTGCTTTCTGTCATGCTGTTCCACAGTGGAGTAATCTGCCCCAGAATCCTCAAGCTCTGATGTTCCAGCAAACTGACCAGCGATTTCAACAGCCAGCTCAACAACAAGCTAGTCCACAGTTTCCTCAACTTCAACAAGCTAGTCCACAGTTTTCTCAGCAGTTTCAGCCTAAGCAGCCAGTGGCGCAGGCAGAGCCCCTTGACAAATGTGCTGTAGCTGATTATGAGCTGATCCAATGTGGACCACCTGGTATCGGTGGTGCTGAGTGTGAAGCTATCAACTGCTGCTTTAACGGACAGCAGTGTTACTATGGGAAGGCGGTGACTGTCCAGTGTATAAGAGATGGTCAGTTTGTGGTAGTGGTGGCTAGAGATGTTACTCTGCCTCGATTGAGCCTGGATTCAGTCAGTCTCTTGGGTGGAAATGATCCACCTTGTAGTCCTGTGGGATCCACACCTTCCTTTGCTATATACCAGTTCCCTGTCACTGCATGTGGCACGAGCATGATGGAGGACAGTGGATATGTGGTGTATGAAAACAGGATGACCTCCTCGTATGAAGTGGGGATTGGACCACTTGGTTCCATTACAAGGGATAGTCATTTTGAATGCCCTTACCAGGATGACCGTTACCTGACCACATTGGTTCCGGTGGCTGGATCATCTGGTCTTCAGTTCCCAACCCACTACAAGCGCTTTGTTGTTAAGATGTTCACATTTGTGGATCCGGCATCACTGGCTCCTCTGCAGGAAACCATCTTCATCCACTGTAGTACAGCAGTGTGCCATCCCTCTTCTGGCTCCTGTGAGCAAAGCTGCTCTAGGAAAAGACGAGACGCTAACGTCAACACCATCTCTAGTGGGCAAACTGTGGTTTCCAGTGGAGAAGTTAACCTGGTCATGTGAACTTTGTGGTTTTA

Function

NR:

description
egg envelope protein ZP2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09146276_09147817.mRNA True 1023 mRNA 0.48 6 9146224 9147831

Neighbor

gene id symbol gene type direction distance location
CI01000029_09142383_09143514 NA coding upstream 2696 9142331 ~ 9143528 (+)
CI01000029_09132920_09139682 ACTR10 coding upstream 5905 9132570 ~ 9140319 (+)
CI01000029_09091229_09095666 PELI2 coding upstream 49211 9091103 ~ 9101802 (+)
CI01000029_09079841_09080368 ARF6.S, ARF6.2, ARF6, ARF6.2.L, ARF6B, ARF6A coding upstream 65589 9078993 ~ 9080635 (+)
CI01000029_09058596_09061088 FKBP3 coding upstream 84901 9058596 ~ 9061323 (+)
CI01000029_09159075_09162036 NA coding downstream 11244 9159075 ~ 9162464 (+)
CI01000029_09166838_09170965 NA coding downstream 19007 9166838 ~ 9170980 (+)
CI01000029_09183609_09186199 NA coding downstream 35202 9183033 ~ 9186473 (+)
CI01000029_09196479_09205243 LRFN5B coding downstream 47233 9195064 ~ 9205417 (+)
CI01000029_09272016_09280223 NA coding downstream 124150 9271981 ~ 9280885 (+)
G156091 NA non-coding upstream 21138 9124475 ~ 9125086 (+)
G156043 NA non-coding upstream 27591 9117716 ~ 9118633 (+)
G156087 NA non-coding upstream 29301 9116632 ~ 9116923 (+)
G156007 NA non-coding upstream 81683 8964818 ~ 9064541 (+)
G156028 NA non-coding downstream 7921 9155752 ~ 9157445 (+)
G156099 NA non-coding downstream 34608 9182439 ~ 9182656 (+)
G156107 NA non-coding downstream 60542 9208373 ~ 9208598 (+)
G156109 NA non-coding downstream 79420 9227251 ~ 9227785 (+)
G156112 NA non-coding downstream 91424 9239255 ~ 9239481 (+)
G155627 NA other upstream 1214047 7931480 ~ 7932177 (+)
G155522 NA other upstream 1508390 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2238792 6905834 ~ 6908633 (+)
G155083 NA other upstream 2655930 6431535 ~ 6490294 (+)

Expression


Co-expression Network