CI01000029_09159075_09162036


Basic Information

Item Value
gene id CI01000029_09159075_09162036
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9159075 ~ 9162464 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09159075_09162036.mRNA
GATTGGCTATTCGGAGCGATTTCGTATCTGTGATTGGCTTAGATCAGGAGTCATTCACGTACCCGCTAGCAACAGCTGGAGCGATGACGTCACGTCAAATAATCCACAGAGTAAATACAGCGAAACAACAAAGCGAACGCGCTGTTTTATGTTTAAAGTACACTTATTAAGGTCACGTGTACAGCACCGTGTAGCCGTGAGCGTGTTGTGCGTGACGGGGACGATCACTGAGTCTGGCCGACGTTACGCGCCTAGAACACGGCTCAAACGGTGGAAGAGGATGAAGGATGAAGGTCGTATGAGAGCGATGGCCAAATTTAAAAACAAAAGGATGGAGAAGTCAAAGCCGGAGTCGGAGAGGGATTCAGGTTTCTCAGACGGCAGCTCGGAGCATCTGAGTGCGATCGATCAGACGGACACGGAGGACTCGTCCCTCTCCAGATCGCAGGTGTCTCCGATGGCAGCGGTGGTGGGCGGAGCTCTGCAGGGCCTCTCACCAATGATCATCATGAACAATGTTGTTCTGAAACAGTCTGGAGAAACCGCTCCGTCTCTGAAACCCTGGGCCTTCAGTCCAGCGGTGGAGGTGGTTCAGCAGCCTCAGGTCGTCTTCCTTCAACCCGTCGTCCCACAGAGAAGCGCCTCCGTGCCGAAGGGACACACATCGAAGCGCCGCCGGCACAAGAAGTACCTCCCTATCCTCAAATCTTACCCCAAAATCGCTCCTCATCCTGGAGACAATCCGCTTAAGAGCAGCAGCAGCAGCTCCGCTTCCTCAGTCAAGAGTTCGTCTTCCTTTCACACAGATTGCGGTCAGAGCTCGTCCTCGCCGTTACCCGGCTCTCTTCCAGCGTCTGCTCTTCCGCACGACGCATCCGCCGATTCGGATACTACCAGCGTCGAACAGAGACCCGAATCCCCGGACGGCCGCTCCAGTTGTAATTCGCGTGGCATTTCCGACACGGACAACAAGATAAAGCGCTTCTGCAACACTTACAACATTCTCAGCAAGTCGGGGTTGCTGGACATCACGCTGCGCACGAAAGAGTTGATTCGGCAGAACCGCCGGACGCAGACGGAGGTGGAGCGGCTGCGCGAACACACGAACATGTTCATGGAAGCGCTGCAGACGGGAGACTCGGGGATCTGGAGCAAGCTGCAGATGAGTATGAACGAGGAAGACAAAGGGAAGGAGCGGACGCCACGTGATGAGGAGAACCGGGACGTGACTCCTCTGAAGTGACGGCATGTGCGTCGTACATGCAACTGTATCTTGAGGTCAAAACAATGATTACCGGTGTAGCTGTCCACTGTTAACAGACTATATGGATGTGCGTTCACTTTCTGACAAGCTTCAGCCTTAATCTAGTTCAGTGCATAAGCTGTTTACTCTCACTTCCTGCTGTAGTTTTCACCTCTTTTGTTTTAGATGAATGAATTTGGACTGTGTCAGAAGGCCTCGTTTTGGGGATCATAGAATGCTAAACGAATGTGCAGAAGTGCAGATCAAGTATGTAGCTGGCAGCCGCTTCTCCTAGACTCTCACAGCAATTATGGTTAATTATGAAAAACGGATCGTTACGGACTGTCTGTGAAATGTGGGATCAGCTGCAGCCCTTCCCATCGTCTAACCCCAATCCTCCCGAAAGATTGTGTAGGAACTTTCGCTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09159075_09162036.mRNA True 1671 mRNA 0.52 5 9159075 9162464

Neighbor

gene id symbol gene type direction distance location
CI01000029_09146276_09147817 NA coding upstream 11244 9146224 ~ 9147831 (+)
CI01000029_09142383_09143514 NA coding upstream 15547 9142331 ~ 9143528 (+)
CI01000029_09132920_09139682 ACTR10 coding upstream 18756 9132570 ~ 9140319 (+)
CI01000029_09091229_09095666 PELI2 coding upstream 62062 9091103 ~ 9101802 (+)
CI01000029_09079841_09080368 ARF6.S, ARF6.2, ARF6, ARF6.2.L, ARF6B, ARF6A coding upstream 78440 9078993 ~ 9080635 (+)
CI01000029_09166838_09170965 NA coding downstream 4374 9166838 ~ 9170980 (+)
CI01000029_09183609_09186199 NA coding downstream 20569 9183033 ~ 9186473 (+)
CI01000029_09196479_09205243 LRFN5B coding downstream 32600 9195064 ~ 9205417 (+)
CI01000029_09272016_09280223 NA coding downstream 109517 9271981 ~ 9280885 (+)
CI01000029_09284343_09295992 NA coding downstream 121879 9284343 ~ 9295992 (+)
G156028 NA non-coding upstream 1630 9155752 ~ 9157445 (+)
G156091 NA non-coding upstream 33989 9124475 ~ 9125086 (+)
G156043 NA non-coding upstream 40442 9117716 ~ 9118633 (+)
G156087 NA non-coding upstream 42152 9116632 ~ 9116923 (+)
G156099 NA non-coding downstream 19975 9182439 ~ 9182656 (+)
G156107 NA non-coding downstream 45909 9208373 ~ 9208598 (+)
G156109 NA non-coding downstream 64787 9227251 ~ 9227785 (+)
G156112 NA non-coding downstream 76791 9239255 ~ 9239481 (+)
G156113 NA non-coding downstream 77618 9240082 ~ 9240339 (+)
G156007 NA other upstream 94534 8964818 ~ 9064541 (+)
G155627 NA other upstream 1226898 7931480 ~ 7932177 (+)
G155522 NA other upstream 1521241 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2251643 6905834 ~ 6908633 (+)
G155083 NA other upstream 2668781 6431535 ~ 6490294 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location