CI01000029_09166838_09170965


Basic Information

Item Value
gene id CI01000029_09166838_09170965
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9166838 ~ 9170980 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09166838_09170965.mRNA
TTCTGTCAGCAGATGATGGACGAAACCTTCTCTCTCTGACCCTCCTGAACCTGCTGCTGGTTGAGTTTGTTCAGAACGCGTCCATACCGCTGGGCCAGAGTCTGGAGGAGCCGGACAGCAAACCCTCCTGCGTCCCGCTGCTGTCGCCCGCTCACGCCTCCTTATGCGGCCCGCTGGAGCTGCCAGAGAGCGCTCTTAGCCATGCCGCGTCCCCGGCGCTGTCAGAGTTCGGCCCCGAGCGAAGCCCGCTGGTGGTTCAGCTGCATCAACCGTCTCCCTCGCCTCCATCACAAACACCCACAATCCTCCAGGACCTGCAGAACCATGACAGCACTTCCTACGTCCTGCTCAACCTGGCCAAAGGATTGGCCGCGTCGGCCGAGCCGCTGGTGTTTGTCCAGGATGACGTGGACGAGGCGCAGGAGGAGATCTCGGCCGGAGACTGCGCGGACGGCGGCGCTCCGTGGTACCTGCGGGTCCAGGAACTGGCGCACGACAGCCTGATCGCCGCCACACGCGCGCAGCTGGCGAAGGAAGCCCGGGCCGGCGGTAACAGTGACCACATTCTCAGCTGTCAATCAGAGGGGCCGAAGAAAGAGCAGCTGCCTCGAGTCGCTCGCACGGCTTCGGAGAAGATCCACCGCTGTCCGTATGAGAGCTGCCACAGGACCTTCACCTATCCTGCACACCTGAAGTACCACCTGAAGACACACAGCTGCGGTCGATCTTTCGCTGAATATTCCAGTCTGCGCAAACACATGCTGGTACACTCTGGTGAGAAGCCGCACGTGTGCTCCATCTGCGGGAAGACGTTCTCTCAGAGCGGCAGCAGGAACGTCCACATGAAGAAGAGACACAGCCGGGAAACTGGTGAAGCGCTCACTCACAGCAGCTTGCTGGAGGCTGACGGAGGCAGCAGTGATTCGATGGTGAACATGAATCTGCATCACGCCATGTTACGAACTCAAGGTCCGGCGGATCCGGTCGTGGTTCTGACTCCGCCTCATGACCTGGTCACCATGACGACAGCGCACGCGTACAGTGATGATGTGGTGGCGCTGTTGTAGTCATTGTTTTTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09166838_09170965.mRNA True 1082 mRNA 0.60 9 9166838 9170980

Neighbor

gene id symbol gene type direction distance location
CI01000029_09159075_09162036 NA coding upstream 4374 9159075 ~ 9162464 (+)
CI01000029_09146276_09147817 NA coding upstream 19007 9146224 ~ 9147831 (+)
CI01000029_09142383_09143514 NA coding upstream 23310 9142331 ~ 9143528 (+)
CI01000029_09132920_09139682 ACTR10 coding upstream 26519 9132570 ~ 9140319 (+)
CI01000029_09091229_09095666 PELI2 coding upstream 69825 9091103 ~ 9101802 (+)
CI01000029_09183609_09186199 NA coding downstream 12053 9183033 ~ 9186473 (+)
CI01000029_09196479_09205243 LRFN5B coding downstream 24084 9195064 ~ 9205417 (+)
CI01000029_09272016_09280223 NA coding downstream 101001 9271981 ~ 9280885 (+)
CI01000029_09284343_09295992 NA coding downstream 113363 9284343 ~ 9295992 (+)
CI01000029_09297723_09298362 NA coding downstream 126743 9297723 ~ 9298604 (+)
G156028 NA non-coding upstream 9393 9155752 ~ 9157445 (+)
G156091 NA non-coding upstream 41752 9124475 ~ 9125086 (+)
G156043 NA non-coding upstream 48205 9117716 ~ 9118633 (+)
G156087 NA non-coding upstream 49915 9116632 ~ 9116923 (+)
G156099 NA non-coding downstream 11459 9182439 ~ 9182656 (+)
G156107 NA non-coding downstream 37393 9208373 ~ 9208598 (+)
G156109 NA non-coding downstream 56271 9227251 ~ 9227785 (+)
G156112 NA non-coding downstream 68275 9239255 ~ 9239481 (+)
G156113 NA non-coding downstream 69102 9240082 ~ 9240339 (+)
G156007 NA other upstream 102297 8964818 ~ 9064541 (+)
G155627 NA other upstream 1234661 7931480 ~ 7932177 (+)
G155522 NA other upstream 1529004 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2259406 6905834 ~ 6908633 (+)
G155083 NA other upstream 2676544 6431535 ~ 6490294 (+)

Expression


Co-expression Network