CI01000029_09183609_09186199


Basic Information

Item Value
gene id CI01000029_09183609_09186199
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 9183033 ~ 9186473 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000029_09183609_09186199.mRNA
TCATAAAAGCCTCGTCTTTTCAAAGACTTCATGAGATAAACAGCCAGAGGTCAAAGGTCAAATGTCTCAGAAAGAAGTAAGATTGTAATTCATGGATTTCTTTTCAGAATGTCAGTGAAACATGTTTTTATTTGTACAACATTTCTATTCAACCTCCAACAGAATATGAATAATCCTGAAACATTTCACTGTCATGATCGGACATGAGAAGACAAAACTAACGAACATCTGCAATTTTATTCTCTTTCATGTCAGAGAAATCAGTGTCAGTCTGTGCAACATTAAAGCATGTCAGTAAAGTCACAGAATTGTGTTGTTTCCAGATGAAAAGGAACGTCTGCACTTTATGTGGTTGTTCTATAAGCGTTGCACGGTTGGCATAGCAACAGCAGTTAATGTTAGTTAATGTGTTTAACGACAGTGTGTGTCATATTAGTGTTGAGAGGAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTATCTATCTATCTATCTATCATCTATCATCTATCTGCTCAGTGAAGAGTTCTGTTGGGTTGGTTGACTGGTTTCCATAGCAACACAACACAACATGGAGTTCCTGCACTGGAGTTGTCAGGACGTGGCGCACTGGATCGAGTCTATCGGATTCCCCCAGTATAAGGCGTGTTTCACTGAGAACTTCATCACAGGCAGAAAACTGATCCATGTCAGCTGCATCACCCTGCCACGGCTGGGAATCACCGACTTCCAGCATATGAAGACTATCTCAGCTCGGGTCGGAGAACTGCTCGGGGTCTCGGAGCCGCGCTGGTGTCGGAGCGTTGCGGATCCCCCTCATGATGACCTGACAGGTTTCCTGAAGATGAAGAGCAGGACCGGCCAGCACACAGATTCCCTCACATATGAGCAGTTCCTCATTAACAAGAGCAAATAAACCCGCTTCAATCAATCAATCAATCAATCAAAGAGCAGCTCTTGAACATTCAGTGTGTTTTCTACAATATGATTTTGAAGAATCACAACTGGAGTCCGTAAACACAACGAGTCCTGCATTAAACAGATGTTCACATGCTGAAAATAATGCATTATTGTGCATTATTACTAGCGGCATCTGCTATTAAACTGATTATTATAAGCGTTCAAAACATAAAACAACTCATGAAACAGAAAAGAATGTAAATGATGTACAGAATTAGAAATTGCAATCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000029_09183609_09186199.mRNA True 1195 mRNA 0.41 3 9183033 9186473

Neighbor

gene id symbol gene type direction distance location
CI01000029_09166838_09170965 NA coding upstream 12053 9166838 ~ 9170980 (+)
CI01000029_09159075_09162036 NA coding upstream 20569 9159075 ~ 9162464 (+)
CI01000029_09146276_09147817 NA coding upstream 35202 9146224 ~ 9147831 (+)
CI01000029_09142383_09143514 NA coding upstream 39505 9142331 ~ 9143528 (+)
CI01000029_09132920_09139682 ACTR10 coding upstream 42714 9132570 ~ 9140319 (+)
CI01000029_09196479_09205243 LRFN5B coding downstream 8591 9195064 ~ 9205417 (+)
CI01000029_09272016_09280223 NA coding downstream 85508 9271981 ~ 9280885 (+)
CI01000029_09284343_09295992 NA coding downstream 97870 9284343 ~ 9295992 (+)
CI01000029_09297723_09298362 NA coding downstream 111250 9297723 ~ 9298604 (+)
CI01000029_09322744_09351108 PAK5, PAK7 coding downstream 136271 9322744 ~ 9351748 (+)
G156099 NA non-coding upstream 377 9182439 ~ 9182656 (+)
G156028 NA non-coding upstream 25588 9155752 ~ 9157445 (+)
G156091 NA non-coding upstream 57947 9124475 ~ 9125086 (+)
G156043 NA non-coding upstream 64400 9117716 ~ 9118633 (+)
G156087 NA non-coding upstream 66110 9116632 ~ 9116923 (+)
G156107 NA non-coding downstream 21900 9208373 ~ 9208598 (+)
G156109 NA non-coding downstream 40778 9227251 ~ 9227785 (+)
G156112 NA non-coding downstream 52782 9239255 ~ 9239481 (+)
G156113 NA non-coding downstream 53609 9240082 ~ 9240339 (+)
G156115 NA non-coding downstream 63591 9250064 ~ 9250270 (+)
G156007 NA other upstream 118492 8964818 ~ 9064541 (+)
G155627 NA other upstream 1250856 7931480 ~ 7932177 (+)
G155522 NA other upstream 1545199 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 2275601 6905834 ~ 6908633 (+)
G155083 NA other upstream 2692739 6431535 ~ 6490294 (+)

Expression


Co-expression Network