Gene
RNA
| Item | Value |
|---|---|
| gene id | G153248 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 2726135 ~ 2726424 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: putative ATP-dependent RNA helicase DHX33 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174038 | True | 290 | lncRNA | 0.34 | 1 | 2726135 | 2726424 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02593889_02603627 | HSF2 | coding | downstream | 122508 | 2593391 ~ 2603627 (-) |
| CI01000029_02589994_02592379 | NA | coding | downstream | 133756 | 2587549 ~ 2592379 (-) |
| CI01000029_02539755_02540836 | FABP7B, FABP7 | coding | downstream | 184730 | 2539729 ~ 2542444 (-) |
| CI01000029_02532272_02537205 | SMPDL3A | coding | downstream | 188930 | 2532200 ~ 2537205 (-) |
| CI01000029_02502175_02516608 | CLVS2 | coding | downstream | 208755 | 2502156 ~ 2517380 (-) |
| CI01000029_02738375_02739517 | GJA1, CX43 | coding | upstream | 11630 | 2738054 ~ 2740239 (-) |
| CI01000029_02742245_02743081 | CX32.2 | coding | upstream | 15529 | 2741953 ~ 2744224 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | upstream | 27324 | 2753748 ~ 2761527 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | upstream | 35183 | 2761607 ~ 2763768 (-) |
| CI01000029_02764957_02770946 | HSDL1 | coding | upstream | 38533 | 2764957 ~ 2771393 (-) |
| G153245 | NA | non-coding | downstream | 2295 | 2723608 ~ 2723840 (-) |
| G153244 | NA | non-coding | downstream | 3542 | 2722297 ~ 2722593 (-) |
| G153243 | NA | non-coding | downstream | 3994 | 2721831 ~ 2722141 (-) |
| G153240 | NA | non-coding | downstream | 7477 | 2718451 ~ 2718658 (-) |
| G153208 | NA | non-coding | downstream | 13984 | 2658813 ~ 2712151 (-) |
| G153250 | NA | non-coding | upstream | 3470 | 2729894 ~ 2730161 (-) |
| G153251 | NA | non-coding | upstream | 4131 | 2730555 ~ 2730775 (-) |
| G153256 | NA | non-coding | upstream | 21673 | 2748097 ~ 2748310 (-) |
| G153259 | NA | non-coding | upstream | 86699 | 2813123 ~ 2814507 (-) |
| G153277 | NA | non-coding | upstream | 90178 | 2816602 ~ 2817026 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1432012 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 522353 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 979799 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1733919 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 2259684 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4443943 | 7170367 ~ 7170951 (-) |
