Gene
RNA
| Item | Value |
|---|---|
| gene id | G153277 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 2816602 ~ 2817026 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174067 | True | 425 | lncRNA | 0.35 | 1 | 2816602 | 2817026 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02764957_02770946 | HSDL1 | coding | downstream | 45209 | 2764957 ~ 2771393 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | downstream | 52834 | 2761607 ~ 2763768 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | downstream | 55075 | 2753748 ~ 2761527 (-) |
| CI01000029_02742245_02743081 | CX32.2 | coding | downstream | 72378 | 2741953 ~ 2744224 (-) |
| CI01000029_02738375_02739517 | GJA1, CX43 | coding | downstream | 76363 | 2738054 ~ 2740239 (-) |
| CI01000029_02837412_02857934 | NA | coding | upstream | 19737 | 2836763 ~ 2857940 (-) |
| CI01000029_02957572_02962601 | NA | coding | upstream | 140401 | 2957427 ~ 2963354 (-) |
| CI01000029_03382508_03395312 | NA | coding | upstream | 565324 | 3382350 ~ 3395312 (-) |
| CI01000029_03397097_03444565 | SLC35F1 | coding | upstream | 579113 | 3396139 ~ 3444565 (-) |
| CI01000029_03503783_03509429 | NUS1 | coding | upstream | 686637 | 3503663 ~ 3509429 (-) |
| G153259 | NA | non-coding | downstream | 2095 | 2813123 ~ 2814507 (-) |
| G153256 | NA | non-coding | downstream | 68292 | 2748097 ~ 2748310 (-) |
| G153251 | NA | non-coding | downstream | 85827 | 2730555 ~ 2730775 (-) |
| G153250 | NA | non-coding | downstream | 86441 | 2729894 ~ 2730161 (-) |
| G153248 | NA | non-coding | downstream | 90178 | 2726135 ~ 2726424 (-) |
| G153279 | NA | non-coding | upstream | 5373 | 2822399 ~ 2822630 (-) |
| G153280 | NA | non-coding | upstream | 6038 | 2823064 ~ 2823301 (-) |
| G153281 | NA | non-coding | upstream | 8046 | 2825072 ~ 2825289 (-) |
| G153282 | NA | non-coding | upstream | 12232 | 2829258 ~ 2829463 (-) |
| G153283 | NA | non-coding | upstream | 18246 | 2835272 ~ 2835498 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 223800 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1522479 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 431751 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 889197 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1643317 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 2169082 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4353341 | 7170367 ~ 7170951 (-) |
