Gene
RNA
| Item | Value |
|---|---|
| gene id | G153289 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 2850037 ~ 2850374 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174079 | True | 338 | lncRNA | 0.53 | 1 | 2850037 | 2850374 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_02764957_02770946 | HSDL1 | coding | downstream | 78644 | 2764957 ~ 2771393 (-) |
| CI01000029_02762066_02762926 | CX32.3 | coding | downstream | 86269 | 2761607 ~ 2763768 (-) |
| CI01000029_02753815_02761288 | CX28.9 | coding | downstream | 88510 | 2753748 ~ 2761527 (-) |
| CI01000029_02742245_02743081 | CX32.2 | coding | downstream | 105813 | 2741953 ~ 2744224 (-) |
| CI01000029_02738375_02739517 | GJA1, CX43 | coding | downstream | 109798 | 2738054 ~ 2740239 (-) |
| CI01000029_02957572_02962601 | NA | coding | upstream | 107053 | 2957427 ~ 2963354 (-) |
| CI01000029_03382508_03395312 | NA | coding | upstream | 531976 | 3382350 ~ 3395312 (-) |
| CI01000029_03397097_03444565 | SLC35F1 | coding | upstream | 545765 | 3396139 ~ 3444565 (-) |
| CI01000029_03503783_03509429 | NUS1 | coding | upstream | 653289 | 3503663 ~ 3509429 (-) |
| CI01000029_03534096_03563671 | NA | coding | upstream | 683678 | 3534052 ~ 3563671 (-) |
| G153288 | NA | non-coding | downstream | 451 | 2849367 ~ 2849586 (-) |
| G153287 | NA | non-coding | downstream | 1184 | 2848603 ~ 2848853 (-) |
| G153286 | NA | non-coding | downstream | 1598 | 2848204 ~ 2848439 (-) |
| G153285 | NA | non-coding | downstream | 10376 | 2839378 ~ 2839661 (-) |
| G153284 | NA | non-coding | downstream | 14258 | 2835577 ~ 2835779 (-) |
| G153299 | NA | non-coding | upstream | 25217 | 2875591 ~ 2875796 (-) |
| G153333 | NA | non-coding | upstream | 62558 | 2912932 ~ 2914231 (-) |
| G153373 | NA | non-coding | upstream | 198685 | 3049059 ~ 3049329 (-) |
| G153985 | NA | non-coding | upstream | 460336 | 3310710 ~ 3310981 (-) |
| G153952 | NA | non-coding | upstream | 498007 | 3348381 ~ 3358355 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 257235 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 1555914 | 1292249 ~ 1294123 (-) |
| G153891 | NA | other | upstream | 398403 | 3248777 ~ 3286554 (-) |
| CI01000029_03698769_03707177 | NA | other | upstream | 855849 | 3698572 ~ 3707883 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 1609969 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 2135734 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 4319993 | 7170367 ~ 7170951 (-) |
