Gene
RNA
| Item | Value |
|---|---|
| gene id | G154017 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 3574064 ~ 3574456 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174896 | True | 393 | lncRNA | 0.35 | 1 | 3574064 | 3574456 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_03534096_03563671 | NA | coding | downstream | 10393 | 3534052 ~ 3563671 (-) |
| CI01000029_03503783_03509429 | NUS1 | coding | downstream | 64635 | 3503663 ~ 3509429 (-) |
| CI01000029_03397097_03444565 | SLC35F1 | coding | downstream | 129499 | 3396139 ~ 3444565 (-) |
| CI01000029_03382508_03395312 | NA | coding | downstream | 178752 | 3382350 ~ 3395312 (-) |
| CI01000029_02957572_02962601 | NA | coding | downstream | 610710 | 2957427 ~ 2963354 (-) |
| CI01000029_03590053_03594170 | VGLL2, VGLL2A | coding | upstream | 15197 | 3589653 ~ 3594904 (-) |
| CI01000029_03625037_03636215 | RFX6 | coding | upstream | 50248 | 3624704 ~ 3637033 (-) |
| CI01000029_03698769_03707177 | NA | coding | upstream | 124116 | 3698572 ~ 3707883 (-) |
| CI01000029_03723621_03726874 | NA | coding | upstream | 148731 | 3723187 ~ 3727070 (-) |
| CI01000029_03746973_03752660 | PLG | coding | upstream | 172480 | 3746936 ~ 3752660 (-) |
| G153952 | NA | non-coding | downstream | 215709 | 3348381 ~ 3358355 (-) |
| G153985 | NA | non-coding | downstream | 263083 | 3310710 ~ 3310981 (-) |
| G153373 | NA | non-coding | downstream | 524735 | 3049059 ~ 3049329 (-) |
| G153333 | NA | non-coding | downstream | 659833 | 2912932 ~ 2914231 (-) |
| G153299 | NA | non-coding | downstream | 698268 | 2875591 ~ 2875796 (-) |
| G154040 | NA | non-coding | upstream | 59529 | 3633985 ~ 3634543 (-) |
| G154046 | NA | non-coding | upstream | 113396 | 3687852 ~ 3688128 (-) |
| G154047 | NA | non-coding | upstream | 113771 | 3688227 ~ 3688470 (-) |
| G154057 | NA | non-coding | upstream | 161775 | 3736231 ~ 3740719 (-) |
| G154137 | NA | non-coding | upstream | 427720 | 4002176 ~ 4002475 (-) |
| G153891 | NA | other | downstream | 287510 | 3248777 ~ 3286554 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 981262 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 2279941 | 1292249 ~ 1294123 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 885887 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 1411652 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 3595911 | 7170367 ~ 7170951 (-) |
| G156495 | NA | other | upstream | 3791871 | 7365007 ~ 7371921 (-) |
