G153562


Basic Information

Item Value
gene id G153562
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4002925 ~ 4003129 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU174394
TTAAAACTCAATGGACTCAGGGGAGGCGCAGACTCTCGTATGAGACACCCACACCTGTGGTTGTCGCTGTTGGACAGTGTTACTTTAGAAAAACAAGTGATTTATACACTTCACATACACTTCAAATGCATTATGGGATACTGTATATGCTAAATGTATACATTGTAGAAAACAACCTTTTGTTGTACTAAGGAACTTGTTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174394 True 205 lncRNA 0.39 1 4002925 4003129

Neighbor

gene id symbol gene type direction distance location
CI01000029_03976118_03980629 SNX9, SNX9B coding upstream 22125 3976118 ~ 3980800 (+)
CI01000029_03855238_03922931 MLLT4, AFDN coding upstream 79805 3855238 ~ 3923120 (+)
CI01000029_03830894_03838298 NA coding upstream 164600 3829607 ~ 3838325 (+)
CI01000029_03708374_03721140 NA coding upstream 281785 3708374 ~ 3721140 (+)
CI01000029_03689026_03697933 SLC22A2 coding upstream 304851 3689026 ~ 3698074 (+)
CI01000029_04007545_04011744 NA coding downstream 4416 4007545 ~ 4012008 (+)
CI01000029_04060211_04069639 NA coding downstream 55609 4058738 ~ 4070460 (+)
CI01000029_04076167_04079831 NA coding downstream 72667 4075796 ~ 4079964 (+)
CI01000029_04099307_04107542 LIN9 coding downstream 96178 4099307 ~ 4107547 (+)
CI01000029_04143243_04143794 NA coding downstream 140114 4143243 ~ 4144051 (+)
G153561 NA non-coding upstream 364 4002324 ~ 4002561 (+)
G153555 NA non-coding upstream 8549 3992553 ~ 3994376 (+)
G153492 NA non-coding upstream 18425 3750312 ~ 3984500 (+)
G153541 NA non-coding upstream 59163 3933105 ~ 3943762 (+)
G153491 NA non-coding upstream 271298 3698482 ~ 3731627 (+)
G153568 NA non-coding downstream 9558 4012687 ~ 4012998 (+)
G153589 NA non-coding downstream 70064 4073193 ~ 4073634 (+)
G153598 NA non-coding downstream 115402 4118531 ~ 4118925 (+)
G153600 NA non-coding downstream 116756 4119885 ~ 4120221 (+)
G153602 NA non-coding downstream 121630 4124759 ~ 4135507 (+)
G153475 NA other upstream 440921 3545125 ~ 3562004 (+)
G152451 NA other upstream 1239986 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 2475026 1526754 ~ 1527899 (+)
G151495 NA other upstream 3631003 366541 ~ 371922 (+)
G151415 NA other upstream 3777680 170521 ~ 225245 (+)
G153790 NA other downstream 730460 4733589 ~ 4740107 (+)
G154587 NA other downstream 1267891 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1454112 5461497 ~ 5470346 (+)
G155079 NA other downstream 2279556 6282685 ~ 6288398 (+)
G155083 NA other downstream 2428406 6431535 ~ 6490294 (+)

Expression


Co-expression Network