Gene
RNA
| Item | Value |
|---|---|
| gene id | G154147 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 4068588 ~ 4068822 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU175034 | True | 235 | lncRNA | 0.43 | 1 | 4068588 | 4068822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_04046704_04057783 | NA | coding | downstream | 10332 | 4046646 ~ 4058256 (-) |
| CI01000029_04017725_04032225 | EFR3BB, CCL33.2, EFR3B | coding | downstream | 36363 | 4017193 ~ 4032225 (-) |
| CI01000029_03988871_03998768 | NA | coding | downstream | 69820 | 3988590 ~ 3998768 (-) |
| CI01000029_03949550_03958610 | NA | coding | downstream | 109844 | 3949306 ~ 3958744 (-) |
| CI01000029_03942459_03946094 | NA | coding | downstream | 122494 | 3942436 ~ 3946094 (-) |
| CI01000029_04071708_04075046 | NA | coding | upstream | 1902 | 4070724 ~ 4075299 (-) |
| CI01000029_04108560_04110587 | MIXL1 | coding | upstream | 39576 | 4108398 ~ 4110871 (-) |
| CI01000029_04115189_04121331 | NA | coding | upstream | 46341 | 4115163 ~ 4121331 (-) |
| CI01000029_04122433_04123725 | TTC32 | coding | upstream | 53386 | 4122208 ~ 4123725 (-) |
| CI01000029_04125071_04135324 | MATN3, MATN3A | coding | upstream | 55919 | 4124741 ~ 4135374 (-) |
| G154146 | NA | non-coding | downstream | 3738 | 4064572 ~ 4064850 (-) |
| G154144 | NA | non-coding | downstream | 6166 | 4062182 ~ 4062422 (-) |
| G154140 | NA | non-coding | downstream | 11330 | 4056737 ~ 4057258 (-) |
| G154137 | NA | non-coding | downstream | 66113 | 4002176 ~ 4002475 (-) |
| G154057 | NA | non-coding | downstream | 327869 | 3736231 ~ 3740719 (-) |
| G154148 | NA | non-coding | upstream | 431 | 4069253 ~ 4070441 (-) |
| G154152 | NA | non-coding | upstream | 7066 | 4075888 ~ 4076115 (-) |
| G154154 | NA | non-coding | upstream | 30148 | 4098970 ~ 4101128 (-) |
| G154169 | NA | non-coding | upstream | 166954 | 4235776 ~ 4236640 (-) |
| CI01000029_03698769_03707177 | NA | other | downstream | 361336 | 3698572 ~ 3707883 (-) |
| G153891 | NA | other | downstream | 782034 | 3248777 ~ 3286554 (-) |
| CI01000029_02589994_02592379 | NA | other | downstream | 1475786 | 2587549 ~ 2592379 (-) |
| CI01000029_01293143_01293964 | BATF3 | other | downstream | 2774465 | 1292249 ~ 1294123 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | upstream | 391521 | 4460159 ~ 4463540 (-) |
| G154415 | NA | other | upstream | 917286 | 4986108 ~ 4990990 (-) |
| G156542 | NA | other | upstream | 3101545 | 7170367 ~ 7170951 (-) |
| G156495 | NA | other | upstream | 3297505 | 7365007 ~ 7371921 (-) |
