G153605


Basic Information

Item Value
gene id G153605
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 4141904 ~ 4142121 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU174441
CGAGAACCGACTCTTTCGAACATATGAACAGAGGACTTCCGACAGTTTTATTAAAACACTTTACATAGTAGTGATTTTAATAAATAACATAAAACTTAATAATAAAAACGCTTGTCTGTCAGGACGCCCTTGACGTAATACGCCATGATGTAAATGAATTCATTTTGAACAGGTTCTTTGAAATGAACTGTTCATTTGAACCGATTCGCGAAAAGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU174441 True 218 lncRNA 0.34 1 4141904 4142121

Neighbor

gene id symbol gene type direction distance location
CI01000029_04099307_04107542 LIN9 coding upstream 34357 4099307 ~ 4107547 (+)
CI01000029_04076167_04079831 NA coding upstream 61940 4075796 ~ 4079964 (+)
CI01000029_04060211_04069639 NA coding upstream 71444 4058738 ~ 4070460 (+)
CI01000029_04007545_04011744 NA coding upstream 129896 4007545 ~ 4012008 (+)
CI01000029_03976118_03980629 SNX9, SNX9B coding upstream 161104 3976118 ~ 3980800 (+)
CI01000029_04143243_04143794 NA coding downstream 1122 4143243 ~ 4144051 (+)
CI01000029_04213048_04215977 NA coding downstream 70927 4213048 ~ 4216310 (+)
CI01000029_04223968_04232159 CLIC4, CLIC5, CLIC5B coding downstream 81423 4223544 ~ 4232309 (+)
CI01000029_04253844_04257502 NA coding downstream 111605 4253726 ~ 4257678 (+)
CI01000029_04389599_04399047 OPN8A coding downstream 247478 4389599 ~ 4399065 (+)
G153602 NA non-coding upstream 6397 4124759 ~ 4135507 (+)
G153600 NA non-coding upstream 21683 4119885 ~ 4120221 (+)
G153598 NA non-coding upstream 22979 4118531 ~ 4118925 (+)
G153589 NA non-coding upstream 68270 4073193 ~ 4073634 (+)
G153568 NA non-coding upstream 128906 4012687 ~ 4012998 (+)
G153645 NA non-coding downstream 117197 4259318 ~ 4259607 (+)
G153646 NA non-coding downstream 117789 4259910 ~ 4260205 (+)
G153647 NA non-coding downstream 118180 4260301 ~ 4260539 (+)
G153649 NA non-coding downstream 122826 4264947 ~ 4265213 (+)
G153651 NA non-coding downstream 125626 4267747 ~ 4268078 (+)
G153475 NA other upstream 579900 3545125 ~ 3562004 (+)
G152451 NA other upstream 1378965 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 2614005 1526754 ~ 1527899 (+)
G151495 NA other upstream 3769982 366541 ~ 371922 (+)
G151415 NA other upstream 3916659 170521 ~ 225245 (+)
G153790 NA other downstream 591468 4733589 ~ 4740107 (+)
G154587 NA other downstream 1128899 5271020 ~ 5271535 (+)
CI01000029_05461497_05468985 BATF other downstream 1315120 5461497 ~ 5470346 (+)
G155079 NA other downstream 2140564 6282685 ~ 6288398 (+)
G155083 NA other downstream 2289414 6431535 ~ 6490294 (+)

Expression


Co-expression Network