Gene
RNA
| Item | Value |
|---|---|
| gene id | G153790 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 4733589 ~ 4740107 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU174646 | True | 643 | TUCP | 0.63 | 2 | 4733589 | 4740107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_04590418_04605290 | NA | coding | upstream | 127895 | 4590284 ~ 4605694 (+) |
| CI01000029_04521600_04521771 | NA | coding | upstream | 210838 | 4521600 ~ 4522751 (+) |
| CI01000029_04478628_04483582 | NA | coding | upstream | 249988 | 4476420 ~ 4483601 (+) |
| CI01000029_04409794_04419021 | OPN8B | coding | upstream | 314568 | 4409794 ~ 4419021 (+) |
| CI01000029_04389599_04399047 | OPN8A | coding | upstream | 334524 | 4389599 ~ 4399065 (+) |
| CI01000029_04981453_04995255 | NA | coding | downstream | 241038 | 4981145 ~ 4995662 (+) |
| CI01000029_05041887_05044363 | NA | coding | downstream | 300890 | 5040997 ~ 5045063 (+) |
| CI01000029_05104260_05107686 | BMP2B | coding | downstream | 363112 | 5103219 ~ 5107804 (+) |
| CI01000029_05232703_05233677 | TAAR11 | coding | downstream | 490085 | 5230192 ~ 5234070 (+) |
| CI01000029_05267765_05268790 | TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B | coding | downstream | 527583 | 5267690 ~ 5268884 (+) |
| G153775 | NA | non-coding | upstream | 23841 | 4693735 ~ 4709748 (+) |
| G153703 | NA | non-coding | upstream | 305404 | 4427708 ~ 4428185 (+) |
| G153672 | NA | non-coding | upstream | 371551 | 4330530 ~ 4362038 (+) |
| G153663 | NA | non-coding | upstream | 438611 | 4294761 ~ 4294978 (+) |
| G154352 | NA | non-coding | downstream | 191872 | 4931979 ~ 4932238 (+) |
| G154353 | NA | non-coding | downstream | 200360 | 4940467 ~ 4940703 (+) |
| G154358 | NA | non-coding | downstream | 209197 | 4949304 ~ 4949565 (+) |
| G154360 | NA | non-coding | downstream | 213596 | 4953703 ~ 4953910 (+) |
| G154361 | NA | non-coding | downstream | 219388 | 4959495 ~ 4959708 (+) |
| G153475 | NA | other | upstream | 1171585 | 3545125 ~ 3562004 (+) |
| G152451 | NA | other | upstream | 1970650 | 2761594 ~ 2762939 (+) |
| CI01000029_01526863_01527414 | NA | other | upstream | 3205690 | 1526754 ~ 1527899 (+) |
| G151495 | NA | other | upstream | 4361667 | 366541 ~ 371922 (+) |
| G151415 | NA | other | upstream | 4508344 | 170521 ~ 225245 (+) |
| G154587 | NA | other | downstream | 530913 | 5271020 ~ 5271535 (+) |
| CI01000029_05461497_05468985 | BATF | other | downstream | 717134 | 5461497 ~ 5470346 (+) |
| G155079 | NA | other | downstream | 1542578 | 6282685 ~ 6288398 (+) |
| G155083 | NA | other | downstream | 1691428 | 6431535 ~ 6490294 (+) |
| CI01000029_06906861_06907157 | NA | other | downstream | 2166081 | 6905834 ~ 6908633 (+) |
