G154587


Basic Information

Item Value
gene id G154587
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 5271020 ~ 5271535 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU175511
CAGGAATACTTCCAGAAAACATTGTCGGTGAACACAATCCACCGTGCCATTCGCCGTTGCCAGCTAAAACTCTATAGGTCAAAAAAGAAGCCATATCTAAACATGATCCAGAAGCGCAGGCATTTTCTCTGGGCCAAGGCTCATTTAAAATGGACTGTGGCAAAGTGGAAAACTGTTCTGTGGTCAGATGAATCAAAATTTGAAGTTCTTTTTGGAAAACTGGGATGCCATGTCATCCGGACTAAAGAGGACAAGGACAACCCAAGTTGTTATCAGCACTCAGTTCAGAAGCCTGCATCTCTGATGGTATGGGGTTGCATGAGTGCGTGTGGCATGGGCAGCTTACACATCTGGAAAGGCACCATCAATGCTGAAAGGTATATCAAAGTTCTAGAACAACATATGCTCCCATCCAGACGTTGTCTCTTTCAGGGAAGACCTTGCATTTTCCAACATGACAATGCCAGACCACATACTGCATCAATTACAACATCATGGCTGCGTAGAAGAAGGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU175511 True 516 TUCP 0.45 1 5271020 5271535

Neighbor

gene id symbol gene type direction distance location
CI01000029_05267765_05268790 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding upstream 2136 5267690 ~ 5268884 (+)
CI01000029_05232703_05233677 TAAR11 coding upstream 36950 5230192 ~ 5234070 (+)
CI01000029_05104260_05107686 BMP2B coding upstream 163216 5103219 ~ 5107804 (+)
CI01000029_05041887_05044363 NA coding upstream 225957 5040997 ~ 5045063 (+)
CI01000029_04981453_04995255 NA coding upstream 275358 4981145 ~ 4995662 (+)
CI01000029_05274996_05279739 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding downstream 3289 5274824 ~ 5279770 (+)
CI01000029_05283234_05284259 TAAR64, TAAR13E, TAAR13D, TAAR13C, TAAR13B coding downstream 11630 5283165 ~ 5284800 (+)
CI01000029_05285683_05294300 TAAR15, STX7, STX7L coding downstream 14049 5285584 ~ 5295240 (+)
CI01000029_05301816_05302796 TAAR14L coding downstream 30116 5301651 ~ 5302893 (+)
CI01000029_05310130_05311110 TAAR14J, TAAR14H, TAAR14I, TAAR14L, TAAR14E coding downstream 38431 5309966 ~ 5311284 (+)
G154586 NA non-coding upstream 640 5270132 ~ 5270380 (+)
G154398 NA non-coding upstream 209605 5061054 ~ 5061415 (+)
G154340 NA non-coding upstream 221633 5048986 ~ 5049387 (+)
G154335 NA non-coding upstream 245838 5024881 ~ 5025182 (+)
G154342 NA non-coding upstream 247730 5019748 ~ 5023290 (+)
G154560 NA non-coding downstream 86620 5358155 ~ 5358603 (+)
G154511 NA non-coding downstream 148577 5420112 ~ 5424220 (+)
G154620 NA non-coding downstream 156127 5427662 ~ 5427872 (+)
G154536 NA non-coding downstream 176521 5448056 ~ 5451291 (+)
G154564 NA non-coding downstream 181775 5453310 ~ 5454135 (+)
G153790 NA other upstream 530913 4733589 ~ 4740107 (+)
G153475 NA other upstream 1709016 3545125 ~ 3562004 (+)
G152451 NA other upstream 2508081 2761594 ~ 2762939 (+)
CI01000029_01526863_01527414 NA other upstream 3743121 1526754 ~ 1527899 (+)
G151495 NA other upstream 4899098 366541 ~ 371922 (+)
CI01000029_05461497_05468985 BATF other downstream 185706 5461497 ~ 5470346 (+)
G155079 NA other downstream 1011150 6282685 ~ 6288398 (+)
G155083 NA other downstream 1160000 6431535 ~ 6490294 (+)
CI01000029_06906861_06907157 NA other downstream 1634653 6905834 ~ 6908633 (+)
G155522 NA other downstream 2363298 7634833 ~ 7637834 (+)

Expression


Co-expression Network