G156525



Basic Information


Item Value
gene id G156525
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7167529 ~ 7169580 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU177723
AACATGTGAAAAACATCTCGCAGACAAAGTCTCATAATAATGGACATTATTTGTCTTCGTTATACAAAAGAAAGTTAAACTCCAAGTTCATATCAGAGTTGAAAGCAGCAAATAAACCGACAAATCATGTCAATAAACATAAAGAAATGATAAAAGCTGGAAGAATGTTCTGTTGGGTTTGCCTTCAGCTCTGTTCTGACACCATTCATAAAGAACATTTTGTCATTTTTAAATCATCAGTTTGTAATCGCAGCAATGGTTACTAACACAACAGCAAACACCTTAAATCTACAGTGACATTTCCATGAAACCCATTTCTCTCCATATGATTCAAAAACACCTAATCAATTCCTAGGGGTTAACGTCTCGTTATTTAAAGAAAAGATGCTCAACCTAACTGAACATTAAACCCAAAATGATTCAGTTCATGTCACATTTAAATCCAGGCTGATCTCATTAGTTTTCATAGGTATTCATATGTAAAGTACATTTTAAAGTACTTTACTTCACATAAATTCATATGTAAAGTATTTTTTTACCTTTGGACTTACTGTACATTACATTACTTACATTTATGTTACATTAAAGAGACCATATTATGCCCTTTTTCAAAGTCTTGATTGTGTTTTTTGGCTCTGCTAGAATATGCTTTCATGCTTGCATTATTTTCCTCATATTCTCCATTGTTGCAGCTCCTCTCTTCTCAGTCTGTCAGTAACGCTCTGTTTAGTTTCTGTCTCTATGAAGCCCCTCCTTCTGAAAAGCACACTGTGCTCTGATTGGTCGGCTGGAACAATGTGTTGTGATTGGTCAATTGCTTCAAGCGTGTTTGGGAAATGTCCTGCCCCTTACCATAACTGCGAGTTTCAACACACTACTAACTAACTCAACCAGGCCCCGCCCCTTTATTCTGCTTATGAATTATTTAAATGAGGAAAATTGTGACGTGTTTTTTGCCGGAAGAAAACTCAAGACTATAATGGAGGAGTTTCAGGGAGTTCAGAAACAGTGACACTGATATAGAGAAGAACTCCTGCTGGAGGGAATTTGCAGCCCTTTTTCATGCTCAAACAGCAACATTACACACTAAAGAAAGATGAATATTTATATATAAAAAAAAAAAAAGCATAATAGGTCCTCTTTAATGCATTGATTTTTATCCAAAGCATCTTGCATTGCATTCAAGGTGCACATTATATCAGTTCATGCATTCCCTGGGAATCAAACCATGACCTGTGTGAATGTTTGAGCTACCGTAAATACAAAATAAGCTGTCAAAATGTTTTATGTACAACTTTAGAGAATTATTTATTTATTTAAAAATTCTGTTGATGAAAGGCTGGTGGGAACAGAAGGAACCTTTGAATTCAATATTCTGTAAACAAATGAATTTTAAACATGTCTTCTCTGAAGCTGTACATGCCAATACATTAATGTTGTAATGTATGTATCTGTGCATTTGTAAAAAAAAATGTGCTAGAACCACACTTTACATAACAATACTTATGAATCTCTAATGAGATCACGTTTATAAATCATAACATCTAATATTTGACTACAAAACTAATGCTAACTTTTTTTAAATATATGGCTGTGTTCATTTGTAAAATTGGCAAATGATTCAGGGATCAGTAACAATGAGTAATTTTGACAACAATGGGTAAATTGTCAAGTTCTAACTATTTAATAATTCCTTTTTTATATATTAAAGTTCTGCAAAGCTTTTTCCTTTCATTTCAGGCACCGCTTTGGATGCACAATAAATAAAGCACAAATAGTTTGTGTGAACACACACATACACACTTAAGACTGATAAAGAACTGAGTGATGATAGAAAAATGAGAAATGAGCAATGTGAAGAAAATAGTTGGGTGAATTTCACAAAAATGTCCAGATCATATTTCACCACTAAATCAAAAGAAAGAAATAAGAAATTACATTTTGCATAAAGAACATGAGGTCTGTTTTAGGAATATTACAAGTTTTGCAAATTTGACGTTATTTTAATAATAATTAAGCACATTTTCTCTGCAATTTGAATAACATACCGTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU177723 True 2052 lncRNA 0.33 1 7167529 7169580

Neighbor


gene id symbol gene type direction distance location
CI01000029_06921800_06922750 TMEM121A, TMEM121B, TMEM121 coding downstream 244414 6921281 ~ 6923115 (-)
CI01000029_06832914_06833074 NDUFB1 coding downstream 334455 6831854 ~ 6833074 (-)
CI01000029_06798103_06806327 EXTL3 coding downstream 360683 6798040 ~ 6806846 (-)
CI01000029_06739098_06769987 NA coding downstream 397542 6738533 ~ 6769987 (-)
CI01000029_06719634_06722376 NA coding downstream 444357 6719527 ~ 6723172 (-)
CI01000029_07332828_07336542 ATP6V1D coding upstream 162715 7332295 ~ 7336542 (-)
CI01000029_07346183_07362585 RBM25.S, RBM25, RBM25B coding upstream 176485 7346065 ~ 7362585 (-)
CI01000029_07388885_07402311 SLC35B2 coding upstream 218664 7388244 ~ 7402678 (-)
CI01000029_07405933_07416452 NA coding upstream 235963 7405543 ~ 7416952 (-)
CI01000029_07419676_07421496 NA coding upstream 250055 7419635 ~ 7422668 (-)
G156492 NA non-coding downstream 54856 7112253 ~ 7112673 (-)
G156477 NA non-coding downstream 101425 7065768 ~ 7066104 (-)
G156473 NA non-coding downstream 112758 7054429 ~ 7054771 (-)
G156469 NA non-coding downstream 130043 7037181 ~ 7037486 (-)
G156463 NA non-coding downstream 138750 7028558 ~ 7028779 (-)
G156542 NA non-coding upstream 1071 7170367 ~ 7170951 (-)
G156545 NA non-coding upstream 15012 7184592 ~ 7184817 (-)
G156547 NA non-coding upstream 20094 7189674 ~ 7189989 (-)
G156516 NA non-coding upstream 38970 7208550 ~ 7208864 (-)
G156574 NA non-coding upstream 91140 7260720 ~ 7263281 (-)
G154415 NA other downstream 2180104 4986108 ~ 4990990 (-)
CI01000029_04460778_04463540 FKBP1B other downstream 2690317 4460159 ~ 4463540 (-)
CI01000029_03698769_03707177 NA other downstream 3460277 3698572 ~ 3707883 (-)
G153891 NA other downstream 3880975 3248777 ~ 3286554 (-)
CI01000029_02589994_02592379 NA other downstream 4574727 2587549 ~ 2592379 (-)
G156495 NA other upstream 196747 7365007 ~ 7371921 (-)

Expression



Co-expression Network