G155480


Basic Information

Item Value
gene id G155480
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7495890 ~ 7496296 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176553
TCGAAACTCCTGAAGTGTTTCCAGATAAGTGTGCTATATGCGTCAGATGTTCAGCCAACAGTCCGTGGGTGTGACGTCTGAGGCCGAGACTAGTCAAGCCCTTCTGAAGTCATATGCAAGCTTTGTTTCAGTAACAAAAGCTATTCCTTTAAGGATCATATGCTTAACACCCAACTCTGAGGCGCACCGCCAATGTAAACATTCATGCATATGTATATCTTATATAAAAATGACCAATGCTAAATTACTGCCATCTGGTATTGAATCATGCTGGACCGCTCAGGCCAGGACGTTTTGCATAGCTCCAGTGGAGTAATTTCAGCAGGCACAGACTGGATGTCCTCCAAATCCTCGCTGAGCTCCAGAGCTTATCCAGTTTTCCTTTTAACCCAGTCGGGGCCTCACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176553 True 407 lncRNA 0.46 1 7495890 7496296

Neighbor

gene id symbol gene type direction distance location
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding upstream 67447 7424439 ~ 7428443 (+)
CI01000029_07365981_07371241 HSP90AB1, HSP90BB, HS90B coding upstream 124289 7365981 ~ 7371601 (+)
CI01000029_07338994_07342252 IF2A, EIF2S1B, EIF2S1 coding upstream 153148 7338994 ~ 7342742 (+)
CI01000029_07304652_07330373 NA coding upstream 165434 7304652 ~ 7330456 (+)
CI01000029_07252129_07298828 GPHN, GPHNA, GPHNB, GPHN.L coding upstream 196044 7252129 ~ 7299846 (+)
CI01000029_07500425_07501888 NA coding downstream 4029 7500325 ~ 7502032 (+)
CI01000029_07503905_07506541 TLR5B coding downstream 7609 7503905 ~ 7506835 (+)
CI01000029_07514095_07516740 NA coding downstream 17710 7514006 ~ 7516742 (+)
CI01000029_07540982_07543852 NA coding downstream 42646 7538942 ~ 7543895 (+)
CI01000029_07602986_07608307 AIDA, AIDA.L coding downstream 106373 7602669 ~ 7608326 (+)
G155478 NA non-coding upstream 3876 7491659 ~ 7492014 (+)
G155477 NA non-coding upstream 4736 7490535 ~ 7491154 (+)
G155471 NA non-coding upstream 11616 7483938 ~ 7484274 (+)
G155470 NA non-coding upstream 13758 7481916 ~ 7482132 (+)
G155469 NA non-coding upstream 19901 7475740 ~ 7475989 (+)
G155483 NA non-coding downstream 2210 7498506 ~ 7498799 (+)
G155530 NA non-coding downstream 56209 7552505 ~ 7552704 (+)
G155531 NA non-coding downstream 58307 7554603 ~ 7555012 (+)
G155532 NA non-coding downstream 59630 7555926 ~ 7556192 (+)
G155533 NA non-coding downstream 62947 7559243 ~ 7559584 (+)
CI01000029_06906861_06907157 NA other upstream 588458 6905834 ~ 6908633 (+)
G155083 NA other upstream 1005596 6431535 ~ 6490294 (+)
G155079 NA other upstream 1207492 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2025544 5461497 ~ 5470346 (+)
G154587 NA other upstream 2224355 5271020 ~ 5271535 (+)
G155522 NA other downstream 138537 7634833 ~ 7637834 (+)
G155627 NA other downstream 435184 7931480 ~ 7932177 (+)
G156007 NA other downstream 1468522 8964818 ~ 9064541 (+)

Expression


Co-expression Network