G155533


Basic Information

Item Value
gene id G155533
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7559243 ~ 7559584 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176613
CTCGAGTTATTATTGGCCTAAACAACAAACACTGAAAGCTGAGCATCATGGGATCTGTATTGGACTTCAACCCTGTCATTAAGACAGTAATCAGGAGTTTTATCTGACGCCAGGGCAATCGTGAAGTTTAACAACGGCAGATGATCAAAGGACGTCCTCGTGCAGAAACACTGGCTCGCCAGAAAGTTGCTGTTTGTAATCTACGACTGCACCATCAACACAGCTGTTTGGTTGCCTCGCAGCAAAACTCTGACACTGGGAGACAAGGTTTCCTCCATGACGAATCACCTCGTCTCGTCTTCGGTCTGCGGGTCCAATTAAATACAGTTCTGCAGCTGTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176613 True 342 lncRNA 0.47 1 7559243 7559584

Neighbor

gene id symbol gene type direction distance location
CI01000029_07540982_07543852 NA coding upstream 15348 7538942 ~ 7543895 (+)
CI01000029_07514095_07516740 NA coding upstream 42501 7514006 ~ 7516742 (+)
CI01000029_07503905_07506541 TLR5B coding upstream 52408 7503905 ~ 7506835 (+)
CI01000029_07500425_07501888 NA coding upstream 57211 7500325 ~ 7502032 (+)
CI01000029_07426889_07428262 TMEM151BA, TMEM151B coding upstream 130800 7424439 ~ 7428443 (+)
CI01000029_07602986_07608307 AIDA, AIDA.L coding downstream 43085 7602669 ~ 7608326 (+)
CI01000029_07643406_07651059 NA coding downstream 83822 7643406 ~ 7651381 (+)
CI01000029_07653640_07663101 NA coding downstream 93750 7653334 ~ 7663101 (+)
CI01000029_07672445_07687240 DUSP10 coding downstream 112861 7672445 ~ 7687873 (+)
CI01000029_07885342_07908699 ARHGAP39 coding downstream 324698 7884282 ~ 7909792 (+)
G155532 NA non-coding upstream 3051 7555926 ~ 7556192 (+)
G155531 NA non-coding upstream 4231 7554603 ~ 7555012 (+)
G155530 NA non-coding upstream 6539 7552505 ~ 7552704 (+)
G155483 NA non-coding upstream 60444 7498506 ~ 7498799 (+)
G155480 NA non-coding upstream 62947 7495890 ~ 7496296 (+)
G155534 NA non-coding downstream 273 7559857 ~ 7560191 (+)
G155536 NA non-coding downstream 13068 7572652 ~ 7572860 (+)
G155537 NA non-coding downstream 19231 7578815 ~ 7579050 (+)
G155541 NA non-coding downstream 28858 7588442 ~ 7588755 (+)
G155506 NA non-coding downstream 31425 7591009 ~ 7591970 (+)
CI01000029_06906861_06907157 NA other upstream 651811 6905834 ~ 6908633 (+)
G155083 NA other upstream 1068949 6431535 ~ 6490294 (+)
G155079 NA other upstream 1270845 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2088897 5461497 ~ 5470346 (+)
G154587 NA other upstream 2287708 5271020 ~ 5271535 (+)
G155522 NA other downstream 75249 7634833 ~ 7637834 (+)
G155627 NA other downstream 371896 7931480 ~ 7932177 (+)
G156007 NA other downstream 1405234 8964818 ~ 9064541 (+)

Expression


Co-expression Network