G155518


Basic Information

Item Value
gene id G155518
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7631715 ~ 7632713 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176597
CCAATTGCGGTTTGAGATCTCTAAACCAGAACATAACCTGCCGTGGAGCGTAAGTTACTATGGCGATGAACACCGCTAAAAGCCAAGTCACTTTCATGGTACCTAAAACCCAGGATTGGTGCAAACTAATCTGAAACTTACCTGGCTAGCCAGCTAATCCGGCTTCATGGTACAGGTCCCTGGTATTGATTTCAAACCAGCTACTTGTGCAACATGAGTTCGGTGTTCCTGCCTCCCAAAATTCAAACCACTCTCTTTTTTAACTGCATTGACTATAGAAATGTACACTAATGCAATGCCTGAGAAAGAAACACATTTTCAGAATGCATAAATGTTGCATAACTATAAGCCTTTTGCGTTGATGTTCTTGTGTAAAGTGTATTTTGGGCTTTAATGTCTTAAAATATTGTGTTACTCACAATTTCTCCGTACACCCCAAGATATTCTTTGACGGGAAGCAGTAAACCCCAGAGTTCATCTGAAGTTGAGGAGCTGGAGGAATCAGTGTTTGCTTCAGTGTCATGGAAATCAGAGACAGCTGGAGACTCCAGTGAACCTGGAGACAGAAAATAACAGTTATAGCCATATGCGACAACAATTATTGAAATCAGAAAAAATAGAATAAAAAAATTCACAAACCTGAAGACTGATCCATTTCAAAGTGAAAGCCGATGTCCACCGGTTTCTCCAAAATAGCATGAGGCCCCTTTTGAATCTCCTCAGCGTCCTCGAACCCTATTTGTGCATCTTTATTTCTGTTGAAATGGCCTCCGTCCTCCTCAAGACCCGCGTCTTTACTGTGGGACAAATCTTCATTCGGATTTAATTCAGAATTCTGAATCAGTTCAGATTCATTTTGCTCCTCATGCATTTCAGGAGTTTCAGGTGGAGCGATCATTTCGGTGTTACTGTCCAAACCCTTCACTTCTTCAGAGTCAATTTTCTCATCTGGGAAAAAAGTGCATAAAGATCTTTATTAAATCATTACCTTGTAAAGCC

Function

NR:

description
PREDICTED: protein NLRC3-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176597 True 999 lncRNA 0.41 1 7631715 7632713

Neighbor

gene id symbol gene type direction distance location
CI01000029_07602986_07608307 AIDA, AIDA.L coding upstream 23389 7602669 ~ 7608326 (+)
CI01000029_07540982_07543852 NA coding upstream 87820 7538942 ~ 7543895 (+)
CI01000029_07514095_07516740 NA coding upstream 114973 7514006 ~ 7516742 (+)
CI01000029_07503905_07506541 TLR5B coding upstream 124880 7503905 ~ 7506835 (+)
CI01000029_07500425_07501888 NA coding upstream 129683 7500325 ~ 7502032 (+)
CI01000029_07643406_07651059 NA coding downstream 10693 7643406 ~ 7651381 (+)
CI01000029_07653640_07663101 NA coding downstream 20621 7653334 ~ 7663101 (+)
CI01000029_07672445_07687240 DUSP10 coding downstream 39732 7672445 ~ 7687873 (+)
CI01000029_07885342_07908699 ARHGAP39 coding downstream 251569 7884282 ~ 7909792 (+)
CI01000029_07922221_07926151 NA coding downstream 289508 7922221 ~ 7927536 (+)
G155520 NA non-coding upstream 19958 7611324 ~ 7611757 (+)
G155506 NA non-coding upstream 39745 7591009 ~ 7591970 (+)
G155541 NA non-coding upstream 42960 7588442 ~ 7588755 (+)
G155537 NA non-coding upstream 52665 7578815 ~ 7579050 (+)
G155536 NA non-coding upstream 58855 7572652 ~ 7572860 (+)
G155555 NA non-coding downstream 71425 7704138 ~ 7704382 (+)
G155561 NA non-coding downstream 83751 7716464 ~ 7717158 (+)
G155563 NA non-coding downstream 86190 7718903 ~ 7719218 (+)
G155611 NA non-coding downstream 184125 7816838 ~ 7817064 (+)
G155613 NA non-coding downstream 185427 7818140 ~ 7818350 (+)
CI01000029_06906861_06907157 NA other upstream 724283 6905834 ~ 6908633 (+)
G155083 NA other upstream 1141421 6431535 ~ 6490294 (+)
G155079 NA other upstream 1343317 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2161369 5461497 ~ 5470346 (+)
G154587 NA other upstream 2360180 5271020 ~ 5271535 (+)
G155522 NA other downstream 2120 7634833 ~ 7637834 (+)
G155627 NA other downstream 298767 7931480 ~ 7932177 (+)
G156007 NA other downstream 1332105 8964818 ~ 9064541 (+)

Expression


Co-expression Network