G155561


Basic Information

Item Value
gene id G155561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 7716464 ~ 7717158 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176641
GCTGATTCTAAGCAATTTGAATAAATGCATTTTGAAAAAATATGATTATTTAAAGTCCCCCTGTAGTCAATAATTTTATCCCTTAAAACTCATCTTTAATCACCAAAGTGTGAAAAAAATTTCTTCATGCCTTAAAATAGCTTGAATGTAACTCTACACCCTTGCCTCATTTAATATATACGTAAATCTATGAATATGCTAATTAGCCCCGCCTCCACTCACTCGCATGAGCTCAGAGATCCACTCGGTCAACTTACTGAGGTAAACGCTGCACAATGGTATCGCTCTTTACAACGTCAGACACATAACAGTAATTAATATGATTAGCCTTTAGCTTGACTACATTATCAAACAGCTAATAATGTGTTGCTAATGTTACAAACTATGTTTCTGCTTCAGAGCGGTCATGGTTAATGATATGCTAAATCCCACCGGCATGTTGACGTGATTGGTTACAAGGTAGTTTGTGACGTCTTTAGATCTCTGCAGTTTTAAAGAGAAAATACTCAGCAATGGTAATGACTTATGAATTTGCACATGGTTTGTCTTAAAGCATAATAAAAACACCACATAGACATATAAACAACATTAAAAACTTGATTTTCACCACAGGGGGTCTTTAAATAAAATCAAATAGATGCATATAGATAAAAATATACTGTAATGATTTTTTCTAAGTGCAAAAATCTTACCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176641 True 695 lncRNA 0.34 1 7716464 7717158

Neighbor

gene id symbol gene type direction distance location
CI01000029_07672445_07687240 DUSP10 coding upstream 28591 7672445 ~ 7687873 (+)
CI01000029_07653640_07663101 NA coding upstream 53363 7653334 ~ 7663101 (+)
CI01000029_07643406_07651059 NA coding upstream 65083 7643406 ~ 7651381 (+)
CI01000029_07602986_07608307 AIDA, AIDA.L coding upstream 108138 7602669 ~ 7608326 (+)
CI01000029_07540982_07543852 NA coding upstream 172569 7538942 ~ 7543895 (+)
CI01000029_07885342_07908699 ARHGAP39 coding downstream 167124 7884282 ~ 7909792 (+)
CI01000029_07922221_07926151 NA coding downstream 205063 7922221 ~ 7927536 (+)
CI01000029_07933165_07944093 NA coding downstream 216007 7933165 ~ 7944093 (+)
CI01000029_07997857_08002279 PYCRL coding downstream 280538 7997696 ~ 8003097 (+)
CI01000029_08007965_08016092 EEF1DB, EEF1D coding downstream 289897 8007055 ~ 8016149 (+)
G155555 NA non-coding upstream 12082 7704138 ~ 7704382 (+)
G155518 NA non-coding upstream 83751 7631715 ~ 7632713 (+)
G155520 NA non-coding upstream 104707 7611324 ~ 7611757 (+)
G155506 NA non-coding upstream 124494 7591009 ~ 7591970 (+)
G155541 NA non-coding upstream 127709 7588442 ~ 7588755 (+)
G155563 NA non-coding downstream 1745 7718903 ~ 7719218 (+)
G155611 NA non-coding downstream 99680 7816838 ~ 7817064 (+)
G155613 NA non-coding downstream 100982 7818140 ~ 7818350 (+)
G155615 NA non-coding downstream 114476 7831634 ~ 7832091 (+)
G155619 NA non-coding downstream 117824 7834982 ~ 7835192 (+)
G155522 NA other upstream 78630 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 809032 6905834 ~ 6908633 (+)
G155083 NA other upstream 1226170 6431535 ~ 6490294 (+)
G155079 NA other upstream 1428066 6282685 ~ 6288398 (+)
CI01000029_05461497_05468985 BATF other upstream 2246118 5461497 ~ 5470346 (+)
G155627 NA other downstream 214322 7931480 ~ 7932177 (+)
G156007 NA other downstream 1247660 8964818 ~ 9064541 (+)

Expression


Co-expression Network