G155672


Basic Information

Item Value
gene id G155672
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8124776 ~ 8127965 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176753
TGTAAAATATTATTTCTTATATTTTTCTAGTGATTTTGAGGTGAAATATGATCTGATTCTGATCATGTACAGTAATAAATGTCACTTTAAGCTCTAATCTTAAATTTGACATGTTTAAAAGGAAACCAGGCATGAAAACAAAATAATGCACAGTTGAAAAGATGGAGTCTGTGTTTTCTCATGAACTCACCAGCTCCGTTCGGGCTCGATCCACCTCCACACTTCTCTGGATGGAGCTGTGAAACGCGCTGTGATTGGTTATCTGCTGCTCGACGGCCGCCAAATCATCTCCCCACGACGACGTCTCGATCAGCCGCTGCTCACAAACACACGCGCGCACATTAAACAAGCAGCATTTCACACTTTATATCTGTACATTTATATCTAGTTGAAACTGGGCAAAGAAATGCATGATGAGGATGTTTAGACAGTCAACTAAAATCCAATTACAACCAACAACAAATCATGTTGCATCAAAACTAAATCACTCCTATTATAATGACCAGCGCTCTCTACACTGGAAGATTGTTGTTTTCTGCTCAATATGCAGTGGATTGTCTCGTTCTTCTCTCCGGCCTTCTCAAAAAGACCGTTTGGGCTCTTCAGCAGACGTCTGTTTTTCATTAACTCTGACCTCACTGACAGGAGGGAGTGCTATATCTGCCGTAAGCGTCGTGTTATTGACCCCTGCGGGAGTCTGAGGAATTCTGGGGTTTTAGGCCTCATGGGAGAGAGTCAAACAGACAGACAGTAATAGTCTGAGTCTGCAAAACAGTGTTTCTGTGGGCGAGTGGGAGGCAGAGAAAGTTTGTGTACTTTGGCAGGATGCCACACTCTAATCTCGCTGAGCTTCATTTCATCTGTTCAGGGTTTTTCTTTCATTTTCTCTTGCTCTGTCCGTCCTGGAAATCACTTCAGCCCGTGTCCTATAGGAACAGAGCAGCATGATAACTGCTATCTTAAGTTGATGTCTATTTCTGTCACATAAGGCTGAGAAGCTCCGCCCACACTGAGATCTCATTGGATGAGAATTCTGCTCAACATACCTGTATATTAAACATTAGATATACTACCATTCAAAAGAAATGTATACTTTTATTCAGCAAGGATGCATTAAATTGATCAAAAGCGACAGTAAAGACATTTATAATGCCACAAAAGATTCTATTTCAGTTCTTTTGAACTTTCTATTTATTAAAGAATCCTGAAAAATAAAATGTATGACGATTTCCACAAAAGTATTCAACCATAAATGTTTCTTGAGCATCAAATCATCATATTAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGATCACAGAAATAAATTACATTTTACTATATATTCACATAGAAAACAAATATTATTACAATGTAAAATATCTGTTTTCTATGTGAATATATAATAAAGAGTAATTTATTCCTGTGATCAAAGCTGAATTTTCAGTGTCACATGATCCTTCAGAAATCATTCTGATATGATGATTTGCTGCTCAAGAAACATTTATGATTATTATCAGTGTTGAAAACAGCTTCATATTTTTGCCTGTTTTAATGAATCTGGGTCAATGACGTGACGGGTCATTTTTTTGTCCAAAGGCCTTAATAATAATAATAATAAAAAACACAGATATGACATCCAAAGTATGTAAGGTAGTACAACTAGATCAATTTTATTGAATCCAAAAGGTTTTAATTATATTTTGCTACATATAAAGGCATTTTAAAGATTTTGAAGTGTCAAAAGGTCATTCAGTTTAACCGTCCAAAGGCCAATACAGCCATTTCATTTGTGATTAAAATATCTTAAAATGTAATAAATGTATATATTTTTTATTCTGCCATGATTTTATAACATCATATATCAACATAGTGCAAAATGGTATTAAAATTATGTGTAGAAGTCGTTGCTTTGTTATGAGAAAGAGTGTCCGGAAAAATGAATTTCATTGATGTCATTCGGAGTAACCAATATAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176753 True 2012 lncRNA 0.36 2 8124776 8127965

Neighbor

gene id symbol gene type direction distance location
CI01000029_08072926_08079001 PHACTR1 coding upstream 45664 8072926 ~ 8079112 (+)
CI01000029_08053844_08058278 NA coding upstream 66255 8053844 ~ 8058521 (+)
CI01000029_08019292_08036434 NA coding upstream 88018 8019292 ~ 8036758 (+)
CI01000029_08007965_08016092 EEF1DB, EEF1D coding upstream 108627 8007055 ~ 8016149 (+)
CI01000029_07997857_08002279 PYCRL coding upstream 121679 7997696 ~ 8003097 (+)
CI01000029_08140259_08140582 NA coding downstream 12210 8140175 ~ 8140945 (+)
CI01000029_08156225_08174249 SLC22A23 coding downstream 27949 8155914 ~ 8175136 (+)
CI01000029_08198433_08203489 NA coding downstream 70400 8198365 ~ 8203538 (+)
CI01000029_08288440_08301175 NA coding downstream 160475 8288440 ~ 8301357 (+)
CI01000029_08318488_08338631 NA coding downstream 190523 8318488 ~ 8339359 (+)
G155691 NA non-coding upstream 26180 8098338 ~ 8098596 (+)
G155689 NA non-coding upstream 28675 8095823 ~ 8096101 (+)
G155665 NA non-coding upstream 32522 8084186 ~ 8092254 (+)
G155674 NA non-coding upstream 58168 8065700 ~ 8066608 (+)
G155667 NA non-coding upstream 60923 8060059 ~ 8063853 (+)
G155698 NA non-coding downstream 26752 8154717 ~ 8154918 (+)
G155713 NA non-coding downstream 86394 8214359 ~ 8226558 (+)
G155731 NA non-coding downstream 99171 8227136 ~ 8227451 (+)
G155718 NA non-coding downstream 100951 8228916 ~ 8231327 (+)
G155716 NA non-coding downstream 108236 8236201 ~ 8237301 (+)
G155627 NA other upstream 192599 7931480 ~ 7932177 (+)
G155522 NA other upstream 486942 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1217344 6905834 ~ 6908633 (+)
G155083 NA other upstream 1634482 6431535 ~ 6490294 (+)
G155079 NA other upstream 1836378 6282685 ~ 6288398 (+)
G156007 NA other downstream 836853 8964818 ~ 9064541 (+)

Expression


Co-expression Network