Gene
RNA
| Item | Value |
|---|---|
| gene id | G155698 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 8154717 ~ 8154918 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase TRIP12 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU176779 | True | 202 | lncRNA | 0.28 | 1 | 8154717 | 8154918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_08140259_08140582 | NA | coding | upstream | 13772 | 8140175 ~ 8140945 (+) |
| CI01000029_08072926_08079001 | PHACTR1 | coding | upstream | 75605 | 8072926 ~ 8079112 (+) |
| CI01000029_08053844_08058278 | NA | coding | upstream | 96196 | 8053844 ~ 8058521 (+) |
| CI01000029_08019292_08036434 | NA | coding | upstream | 117959 | 8019292 ~ 8036758 (+) |
| CI01000029_08007965_08016092 | EEF1DB, EEF1D | coding | upstream | 138568 | 8007055 ~ 8016149 (+) |
| CI01000029_08156225_08174249 | SLC22A23 | coding | downstream | 996 | 8155914 ~ 8175136 (+) |
| CI01000029_08198433_08203489 | NA | coding | downstream | 43447 | 8198365 ~ 8203538 (+) |
| CI01000029_08288440_08301175 | NA | coding | downstream | 133522 | 8288440 ~ 8301357 (+) |
| CI01000029_08318488_08338631 | NA | coding | downstream | 163570 | 8318488 ~ 8339359 (+) |
| CI01000029_08346604_08357224 | NA | coding | downstream | 191483 | 8346401 ~ 8357633 (+) |
| G155672 | NA | non-coding | upstream | 26752 | 8124776 ~ 8127965 (+) |
| G155691 | NA | non-coding | upstream | 56121 | 8098338 ~ 8098596 (+) |
| G155689 | NA | non-coding | upstream | 58616 | 8095823 ~ 8096101 (+) |
| G155665 | NA | non-coding | upstream | 62463 | 8084186 ~ 8092254 (+) |
| G155674 | NA | non-coding | upstream | 88109 | 8065700 ~ 8066608 (+) |
| G155713 | NA | non-coding | downstream | 59441 | 8214359 ~ 8226558 (+) |
| G155731 | NA | non-coding | downstream | 72218 | 8227136 ~ 8227451 (+) |
| G155718 | NA | non-coding | downstream | 73998 | 8228916 ~ 8231327 (+) |
| G155716 | NA | non-coding | downstream | 81283 | 8236201 ~ 8237301 (+) |
| G155722 | NA | non-coding | downstream | 85458 | 8240376 ~ 8240659 (+) |
| G155627 | NA | other | upstream | 222540 | 7931480 ~ 7932177 (+) |
| G155522 | NA | other | upstream | 516883 | 7634833 ~ 7637834 (+) |
| CI01000029_06906861_06907157 | NA | other | upstream | 1247285 | 6905834 ~ 6908633 (+) |
| G155083 | NA | other | upstream | 1664423 | 6431535 ~ 6490294 (+) |
| G155079 | NA | other | upstream | 1866319 | 6282685 ~ 6288398 (+) |
| G156007 | NA | other | downstream | 809900 | 8964818 ~ 9064541 (+) |
