Gene
RNA
| Item | Value |
|---|---|
| gene id | G156900 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000029 |
| NCBI id | null |
| chromosome length | 9486966 |
| location | 8363011 ~ 8363222 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU178144 | True | 212 | lncRNA | 0.38 | 1 | 8363011 | 8363222 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000029_08250264_08262665 | GATA4 | coding | downstream | 100346 | 8250249 ~ 8262665 (-) |
| CI01000029_08237701_08245368 | FDFT1 | coding | downstream | 117643 | 8236195 ~ 8245368 (-) |
| CI01000029_08229070_08234969 | CTSBB | coding | downstream | 128042 | 8228965 ~ 8234969 (-) |
| CI01000029_08205518_08214627 | NA | coding | downstream | 148384 | 8205470 ~ 8214627 (-) |
| CI01000029_08185095_08190376 | NA | coding | downstream | 172635 | 8185029 ~ 8190376 (-) |
| CI01000029_08384203_08407906 | NA | coding | upstream | 20403 | 8382870 ~ 8407906 (-) |
| CI01000029_08463083_08479077 | NA | coding | upstream | 99770 | 8462992 ~ 8479190 (-) |
| CI01000029_08568672_08576837 | SLC25A29 | coding | upstream | 203809 | 8566372 ~ 8577143 (-) |
| CI01000029_08606896_08609369 | NA | coding | upstream | 242284 | 8605506 ~ 8610176 (-) |
| CI01000029_08690880_08711534 | PPP2R5CB, PPP2R5C.L, PPP2R5C | coding | upstream | 327103 | 8690325 ~ 8711919 (-) |
| G156899 | NA | non-coding | downstream | 69 | 8362642 ~ 8362942 (-) |
| G156898 | NA | non-coding | downstream | 1613 | 8361155 ~ 8361398 (-) |
| G156897 | NA | non-coding | downstream | 1905 | 8360804 ~ 8361106 (-) |
| G156896 | NA | non-coding | downstream | 2772 | 8359950 ~ 8360239 (-) |
| G156895 | NA | non-coding | downstream | 3487 | 8359318 ~ 8359524 (-) |
| G156902 | NA | non-coding | upstream | 905 | 8364127 ~ 8364352 (-) |
| G156738 | NA | non-coding | upstream | 1844 | 8365066 ~ 8369292 (-) |
| G156727 | NA | non-coding | upstream | 17504 | 8380726 ~ 8381457 (-) |
| G156913 | NA | non-coding | upstream | 135036 | 8498258 ~ 8503179 (-) |
| G156495 | NA | other | downstream | 993464 | 7365007 ~ 7371921 (-) |
| G156542 | NA | other | downstream | 1192060 | 7170367 ~ 7170951 (-) |
| G154415 | NA | other | downstream | 3375586 | 4986108 ~ 4990990 (-) |
| CI01000029_04460778_04463540 | FKBP1B | other | downstream | 3885799 | 4460159 ~ 4463540 (-) |
| CI01000029_03698769_03707177 | NA | other | downstream | 4655759 | 3698572 ~ 3707883 (-) |
