G155851


Basic Information

Item Value
gene id G155851
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000029
NCBI id null
chromosome length 9486966
location 8589386 ~ 8593261 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU176960
ACATGTTGATAACATAACATTGTTAGCATTTTTCTAACATGAATTAACACATTGCTAACATGATTTAACAAGTGGTTTACATGTTTCTACCATGAATTAGCACATTGATAGCATGATTTTGTACATTGCTAGCCTGAATTAGCATGTTGATAGCATGAATGAACACATTGCTAGCATGTTTTAGTATGTTGCTAACCCAAATTAGCATGTTGCTAATATAACATAGCATGATATACCATGAATTAATATAATATAGCATGAATTAGCATTTTTTAACATTGTTAACATTAATTAGCATGTTTTAACACACTGTAACATGATTTAGCATGTTGCTAACATGTTTTAACATGTTTTACTACATTGCTACCAAGAATTAACACATTGCTAGCATGATATAGCATGTTGATGCCATGTTCTAACACATTGTTAACATGTTTTAAAATGTCGATAGCATAAATTAGCAAGTTTTAACACATTGCTAGCATTAAAAAGCATGTTGTTAGCATGTTTTATCACGTTGTTGACATGAATTAGCTATTTTTTAACATTGCTAACATTAATTAGCATATTTGAACACATTGCAACATGATTTAACATGTTGCTTACATGTTTTAGCACATTTGCTAACATGTTTTACCACATTGCTAGCATGATATAGCATGTTGATATCATGTTTTAACATTGCTAACATGAAATAGCATGTTTTAGCAAATCGGTAGCATGAATTAGCCTGTTTTAACATATTGCTAGCATGAAATAGCATGTTCTTAGCATGTTTTAGCACATTGCTAACATGAAATAGCATGTTGTTACCATGTTAGCATGTTTTAACACATTATTAGCATGTTTTAGCACATTGCTAGCATTTTGCAAGCTAACATAATTATATCATTTCAATAAAAATGATTGTAAAGTGCAACCAGAGCACATGTAAAACTGCTACAAGTAAAATGTGCAAAAAATGTGACAACTTGAAACAGGATAAAGTCAAAGAAATCAATTTGGTTCACTGGTATGAATGTCTCATGCATTCAGAAGTGCTCAATCACGACCACATGCAAAAAGTGCCGCATCACCTTTGCTTTAGTCAGATCTGCTGCACAAACAGCTGTGAAACATTAAATGCATGTACATGTAGCTTTGCCCGGGATCTTGAAATGGAAGTTCTAGGAATTAGTAACTTGTTCTGAGTATCAACAATAACACCTCAATGTTTCCTTTGTTCTGTTTCTCTCATAATTAAACCCGGCGTGTCTTTCAGCCTCCCGCCTCCTTATGTAACAAAACAGTGTGCAATTATGCAAACATCTAAAGAACCTGGTCTGCAAACAAACAAGCCCAATTTACTCCTGAGTTATTCTCATGCATTCATTTTCGAATCCATAAAAATACCCTGTTGCAATGCTTTTGAGTGACTGCTCAGTGAAAAGCATTCTTCTGCAGTCTTACATTAAGACTAATAATAGTTTTAATAGGTCTGTAAATAAAGGCTGTTTAAGAGCGGATTAAAATGACTGCGAATGGTGTAATTAAAATTCAGTGGTGAGGTTTGAACTTGGCAGAACTTGACTGCACTTCACAACCTTCAGCACAAAGCACATTCACGTTTGCTTGGGCGAAGCTCGGGTTTATTAAGGATGTGATTTGAAACCACTCGACTCATTCAGCCTGGAGAATAATGTGAACTATAGACGAGAACATGATGCACAATTATTACACATTCATCTACATGTATTTACATATAAATTGTTATACAATTTTCAGCAGTTAATACAGGTCTAATCGCTTCACATGCTTTATTTTGTAGATAATATCAGACTTTTCTGGTTGTTTTGAATACTTTTTTTTTTTTATAAATTGATACTTATATTCATCAAGGATGCATTAAATTGATCAAAAGTTACAGTAAAGACATTTATAATGTTACAAAAGATTCTATTTCAAATAAATGCTGTTCTTTTGAACTTTCTATTCATCAAAGAATCCTGAAAAATAAAATAAGATAATACAATAAAATAAGTAACACAAAAACTACCCAAACGCTGGGTTGTTACGTCTGACCCAGGATCTGTGTAACACAAAAACTACCCAAACGCTGGGTTGTTACGTCTGACCCAGGATCTGTGTAACACAAAATCGACCCAAACGCTGGGTTGTTACGTCTGACCCAGGATCTGTGTAACACAAAAACTACCCAAACGCTGGGTTGTTACGTCCGACCCAGGATCTGTGTAACACAAAAACTACTCAAACGCCGGGTTGTTACGTCCGACCCAGGATCTGTGTAACACAAAAACTACCCAAACGCTGGGTTGTTACGTCTGACCCAGGATCTGTGTAACACAAAAACTACCCAAACGCTGGGTTGTTACGTCTGACCCAGGATCTGAGTAACACAAACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU176960 True 2403 lncRNA 0.35 2 8589386 8593261

Neighbor

gene id symbol gene type direction distance location
CI01000029_08578097_08583564 SLC25A47A coding upstream 5413 8577815 ~ 8583973 (+)
CI01000029_08558693_08564749 MYH6, MYH7, MYH6.S coding upstream 24390 8558263 ~ 8564996 (+)
CI01000029_08533907_08555317 PAK6 coding upstream 33417 8533907 ~ 8555969 (+)
CI01000029_08506379_08516187 NA coding upstream 73081 8506379 ~ 8516305 (+)
CI01000029_08484998_08502958 NA coding upstream 86217 8484952 ~ 8503169 (+)
CI01000029_08654610_08655443 NA coding downstream 59321 8652582 ~ 8656550 (+)
CI01000029_08743604_08749941 WDR20 coding downstream 147473 8740734 ~ 8750337 (+)
CI01000029_08759743_08761002 GM2581, RPS29, RPS29.S, GM7618, GM7079 coding downstream 166482 8759696 ~ 8761326 (+)
CI01000029_08915550_08920146 NA coding downstream 321162 8914423 ~ 8920358 (+)
CI01000029_08990637_09003719 NA coding downstream 397296 8990557 ~ 9003779 (+)
G155848 NA non-coding upstream 21473 8567615 ~ 8567913 (+)
G155845 NA non-coding upstream 21939 8566307 ~ 8567447 (+)
G155809 NA non-coding upstream 147035 8442140 ~ 8442351 (+)
G155769 NA non-coding upstream 205045 8382868 ~ 8384341 (+)
G155758 NA non-coding upstream 207602 8381585 ~ 8381784 (+)
G155855 NA non-coding downstream 286 8593547 ~ 8593956 (+)
G155853 NA non-coding downstream 1301 8594562 ~ 8595141 (+)
G155860 NA non-coding downstream 2973 8596234 ~ 8597704 (+)
G155866 NA non-coding downstream 9551 8602812 ~ 8603042 (+)
G155867 NA non-coding downstream 11571 8604832 ~ 8605058 (+)
G155627 NA other upstream 657209 7931480 ~ 7932177 (+)
G155522 NA other upstream 951552 7634833 ~ 7637834 (+)
CI01000029_06906861_06907157 NA other upstream 1681954 6905834 ~ 6908633 (+)
G155083 NA other upstream 2099092 6431535 ~ 6490294 (+)
G155079 NA other upstream 2300988 6282685 ~ 6288398 (+)
G156007 NA other downstream 371557 8964818 ~ 9064541 (+)

Expression


Co-expression Network