CI01000030_01426277_01431670 (ANKRD29)


Basic Information

Item Value
gene id CI01000030_01426277_01431670
gene name ANKRD29
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1426277 ~ 1431670 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_01426277_01431670.mRNA
AAGGAGACTCCTCTTGCCAACGCTGTGTTTTGGGCAGCAAGGAAAGGAAACTTGGCTTTGCTTCAGCTGTTGTTGAACAGCGGCCGAGTGGATGTAGACTGCAAAGATGGTCAGTATGGCACCACTGCGTTAATGGTGGCATCATACAGTGGGCATTATGAGTGTGTTCGGGAACTCATCATGCAAGGTGCAGATATTAATCTGCAAAGAGAGACAGGTTCCACCGCCCTCTTCTTTGCTTCACAACAGGGCCATAATGAAATTGTCAAGCTCCTGTTTGAATTTGGAGCGTCCACTGAGTTTCGGACAAAGGATGGCGGCACAGCACTCTCCGCAGCCTGTCAGTATGGTCACTCGACAGTGGTGGACACCCTACTGAAGAACGGCGCCAATGTCCACGACCAGCTCAATGATGGTGCGACAGCCTTATTTTTGGCTTCCCAAGAGGGTCATGTGACTGTAATACGTCAGCTTATGTCATCTGGGGCTAAAGTCAATCAACCTCGAGAGGATGGCACAGCTCCGCTCTGGATGGCAGCCCAGATGGGACATAGTGAGGTGGTGAAAGTTCTGCTGCTACGAGGTGCGGACCGTGATGCAGATAGAAAAGATGGCTCCACGGCTCTGTTCAAGGCTGCACATAAAGGATACTGTAACGTCATTGAGGAACTGCTCAAGTTCTCCCCTTCACTTGGCCTTCTGAAGAACGGTTCTACAGCTCTTCATGCAGCCGTCATGGGCGGGAATCCGAAAACAGTTGCACTGTTGCTGAAGGCAAATGCCGATCCAGCTTTACCCAACAAAGTCAGTTTGAGACAACAAGGAACTGCCGGAGGATCTTACGAGGAACGAGCGCATCCTAAGAATCCTGCGACTGCCGATGCTGAATGGAGGGAGTTGATGACTGCTGTGTTTGTTTTTAAGTCCATGACAAATGAATGCACTACATCTCAGTCCCTTGAGGCTGAAAACAGCAGTCGCTGCCTGCAACAGCTTTCCAGTCTCGTACAGCGGATGCTTGAAGCTTCAGATCAACAACACAAATGCACTGAAAATCAGAATTGCTTATTCTTTATCCTGGAAATGTTATGA

Function

symbol description
ankrd29 Orthologous to human ANKRD29 (ankyrin repeat domain 29).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_01426277_01431670.mRNA True 1092 mRNA 0.49 9 1426277 1431670

Neighbor

gene id symbol gene type direction distance location
CI01000030_01410955_01422296 TTC39C coding upstream 3543 1410955 ~ 1422734 (+)
CI01000030_01390854_01409470 NA coding upstream 16754 1390854 ~ 1409523 (+)
CI01000030_01384095_01386916 NA coding upstream 39341 1384095 ~ 1386936 (+)
CI01000030_01360575_01378361 OSBPL1A coding upstream 47210 1360575 ~ 1379067 (+)
CI01000030_01350908_01353719 LRRC39 coding upstream 72530 1350908 ~ 1353747 (+)
CI01000030_01433149_01437563 VPS4B.S, VPS4B, MGC82073 coding downstream 1479 1433149 ~ 1437930 (+)
CI01000030_01453143_01466193 NA coding downstream 21473 1453143 ~ 1466278 (+)
CI01000030_01480370_01481206 IER5 coding downstream 48368 1480038 ~ 1481702 (+)
CI01000030_01504763_01508773 TAL1 coding downstream 73028 1504698 ~ 1509004 (+)
CI01000030_01514203_01515696 PDZK1IP1 coding downstream 79975 1511645 ~ 1516475 (+)
G157572 NA non-coding upstream 148215 1277295 ~ 1278062 (+)
G157528 NA non-coding upstream 156018 1267594 ~ 1270259 (+)
G157581 NA non-coding upstream 176488 1249527 ~ 1249789 (+)
G157567 NA non-coding upstream 214556 1211503 ~ 1211721 (+)
G157559 NA non-coding upstream 230080 1195850 ~ 1196197 (+)
G157631 NA non-coding downstream 35552 1467222 ~ 1467855 (+)
G157649 NA non-coding downstream 62232 1493902 ~ 1518773 (+)
CI01000030_01683292_01689297 NA non-coding downstream 170860 1682016 ~ 1689371 (+)
G157853 NA non-coding downstream 389618 1821288 ~ 1821735 (+)
G157856 NA non-coding downstream 392034 1823704 ~ 1823918 (+)
CI01000030_01003310_01003776 NA other upstream 419590 1003114 ~ 1003795 (+)
G157227 NA other upstream 1069794 327649 ~ 356483 (+)
G157108 NA other upstream 1279424 116156 ~ 146853 (+)
G157076 NA other upstream 1408521 12878 ~ 17756 (+)
G157726 NA other downstream 205197 1636867 ~ 1638227 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 847443 2277208 ~ 2282743 (+)
G158416 NA other downstream 1164206 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1581786 3018776 ~ 3043773 (+)
G159685 NA other downstream 3000130 4431800 ~ 4488526 (+)

Expression


Co-expression Network