CI01000030_01735473_01743982


Basic Information

Item Value
gene id CI01000030_01735473_01743982
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1734764 ~ 1744746 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_01735473_01743982.mRNA
CGATAAAAAAGAAAAAGCAAAACCCAGACCCTCACCACCACCACCACAAAAAAAAAAAAAAAAAAAAAAAGAAAGCGAAAAAGTTTGGCCAGCCCCTTCATCTGCTCCTCGACAAAGTAAACAATTTAGGGCCTTGTTTGCATTCAGCTCAGCATTGCTGTCTGCATCAACAGTTTAAAACAAAGGCAATCTGAAGAGTGGGCCGAAACAACGGGGGTAAAAAAAAGAAAAAAAAAGAAAAAACACGCAGCAACACCCCCCGCCCCAGCAACAGCCCAGAGATATGTGAAAGCGCAACGAAGGGGGCCGGGAAACTGGGTGCCGGGTGGGTGAGAGTGTGCGGGGACTTTCACACACTCTCCCAGTTGCCCTCCGTGGACCAAGTGCTCTCTCACACAGCGCCCATTGCTAATTAAATATGCAAATGAGGCGTGAGACCCAGACTCTGTGTGTCACATCTGCATTTACCCCCTGTCGAGGGCCCTCAGAGAGCGAGGGGTGACACAAAAAAACCCCTCCCGCTTGAAATAAACAACAAAAAAAGACACTAAACAACAAACAACTAAATACCATGCACAAACAGGCCCATTCACCAGGCCTAAACCCTCTATACAAGAGCATAACAAGCCACTCTATGGGCCGCCGACTGAAAGACAGAGGAGGGATGGTTCCTGCCTATCTCTAATTTTGTTCTCACACCATCAAAAAGATGGGAACGGCGCTCGGGTGTGGGAGAAGAAAAGCAACCTGGAGTGACTCAGTCAACGCGTTATTCTGCCTCGATACGACAACTGAATTCATTATCGAACAATTAAAAAGGGACGCTGAGGAAAAAAGACGTCGTTTAGCGTCCGATAACAAGCCTGGGCTAATTGAGACGGGCTCAGGTCCGCTCGTCCCAACCCGCCGCTTTCTCACCAAGTGCTTTGCTGTAATCCAATTGTGTGTTAAAACCCCGCTTTCAAAAGGCCCTTTACACAGTGGGCTCAGGAACACGAAGGCCCATAAAAGGAGGCAGAAACTTAATTTAGAAATACAAACGGGCCTTTCTGGAGTATCAATGGAAGACATTATGAGATGGTGGGTGCCGAAATTCCTGCATGGTCACACTCGAGACTATCCGGACTATCCGAGGAACTCTTGTGCTAATGGTGTAAGACAAGCTGTCTGGATTGCCAAGCTACCGTTACCAAGACACAAAAGCGGGACATTCCAGGCTTATTCGAACCCTTGTTCCCCCTGGACTGGCGGGGGCATTGGGAACAAGATATCGTTATTAGCTAATGCAGGATACGGACGAGATCTAATCTCAGTGAGTACCGTGAGACCGTCCTTTTGTGGCACGGGAGTCTATGTGTGTACGTACGTGCATGCAGTAATTCATCGCTCTCCAAGAGTCCAGCTGACAGGCTCCAGCTGCAGACGGCAAGGAGACGTGCGACATACATGCAGAGTGTTCATTGCTGTCAGGATCGTGGACACACCTGTCTCTACAACAACTACCGTCTGTAGCCAGTCTGCCACCATTTTAAGACAGTCGCTTCTCAACAGGAACCCAAAACGAAACAATCAGGCCCGTCAGATGCTCAAGGAATCACTCACCCACGGCAATTCCAGCAGCGACGGTGGATCAATTAACGAAAGCATGATTAACATTACAGGAGAGCACCATGGAATAATGGACGTCTCTGGAAAGTGGATTAGGTCGAGAGGAACCTTGACGTGCGGCCGAGATATTGCGCCAGTGAAGGACGCCATCAGCAGCGGCATGACATAAGCCAGACCGAAATAGTTTGGGAATGCAATTGATGAATTGCCATATTGATTCAGTTCTGCCTCACTTACCATAATTATAGCGCTGTAATGGATAGCATTACTGCTGCCACTTTTTGTTTTATCCTTTCTTTTCCTTTTTCATCAACTCTCCACTTCTGAACTTGTTTGGAAACGAACTGTACATGCGGTTATGTGCTCTGATCGAAAAGCCAGAGATGTGAATGACATACTTCTGAAGCCCTGAACCTGTCAAAATTGACTCTTAACTGGAAGCCCTGCATAATTACACTGATTTTGGGGTCATCTGAACCTGATTGCACAAGTTTCTAGGGGAAAATTTACATGAAACATGCTCTTGCTTTCAAAAACATCTACACTAAGCGCAACAGAAGCAAACCTATTGTAGGAATCTCAGTATGATTTTAAAAGTTGGACTATTTTTAAGCTAAAAACAACACTACTGATTATAAGCAGCGATTTATGTTTCTGCCGGTGGGTATCCACACTACACTATAACGCAATGAGAAAAGGCATGTGCAAATACAGTACCAACCAAATATAAACATTATTATTCACCACTGTTTCCATGAGCAAATGATAACTGAGCTCATTATAACATTCTCATTACTCAGTATTATATTTGGTGTTAGTTTTTTCGAGTACGTTTTTTTCCGTTCGATGGTGCGTTTGATGAATTCATTACACAAAAGTTATTTGTGTCTCACAAAGAGAAACGCAGGGACTGCATGATCATTGGTTTACTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_01735473_01743982.mRNA True 2541 mRNA 0.45 7 1734764 1744746

Neighbor

gene id symbol gene type direction distance location
CI01000030_01733476_01734513 NA coding upstream 101 1732804 ~ 1734663 (+)
CI01000030_01683292_01689297 NA coding upstream 45393 1682016 ~ 1689371 (+)
CI01000030_01636207_01648294 TM2D1 coding upstream 86161 1636207 ~ 1648603 (+)
CI01000030_01514203_01515696 PDZK1IP1 coding upstream 218289 1511645 ~ 1516475 (+)
CI01000030_01504763_01508773 TAL1 coding upstream 225760 1504698 ~ 1509004 (+)
CI01000030_01749399_01752421 NA coding downstream 4158 1748904 ~ 1752518 (+)
CI01000030_01818694_01832525 NA coding downstream 71016 1815762 ~ 1832948 (+)
CI01000030_01835873_01839144 NA coding downstream 90774 1835520 ~ 1839180 (+)
CI01000030_01875455_01901837 NA coding downstream 130709 1875455 ~ 1902005 (+)
CI01000030_01902669_01906805 NA coding downstream 157923 1902669 ~ 1907231 (+)
G157649 NA non-coding upstream 215991 1493902 ~ 1518773 (+)
G157631 NA non-coding upstream 266909 1467222 ~ 1467855 (+)
G157572 NA non-coding upstream 456702 1277295 ~ 1278062 (+)
G157528 NA non-coding upstream 464505 1267594 ~ 1270259 (+)
G157853 NA non-coding downstream 76542 1821288 ~ 1821735 (+)
G157856 NA non-coding downstream 78958 1823704 ~ 1823918 (+)
G157857 NA non-coding downstream 81995 1826741 ~ 1827034 (+)
G157855 NA non-coding downstream 165458 1910204 ~ 1910604 (+)
CI01000030_01972795_01974531 NA non-coding downstream 230200 1972795 ~ 1975434 (+)
G157726 NA other upstream 96537 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 728077 1003114 ~ 1003795 (+)
G157227 NA other upstream 1378281 327649 ~ 356483 (+)
G157108 NA other upstream 1587911 116156 ~ 146853 (+)
G157076 NA other upstream 1717008 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 534367 2277208 ~ 2282743 (+)
G158416 NA other downstream 851130 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1268710 3018776 ~ 3043773 (+)
G159685 NA other downstream 2687054 4431800 ~ 4488526 (+)
G159816 NA other downstream 2772032 4516778 ~ 4517381 (+)

Expression


Co-expression Network