CI01000030_01749399_01752421


Basic Information

Item Value
gene id CI01000030_01749399_01752421
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1748904 ~ 1752518 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_01749399_01752421.mRNA
GAATAAATGCATGCGTATGTAAGCAGACTCCCAGACCCTGTATAAGGCCACTTTTAGAGCTGTCAAATATCACAACCTGAATTCATGACTAGATCCGACTTCAGCACCCTGTCACCCGTATGGATTACACCCCACGGACCAGGTTGCAACACAGCAGAGGCAACATCTCAATGTCAGGCCTGTTTCTTTACAGTCTTTCCTTCTTTTCCTCCCTTTCTTTTGCTCCCTCTCCCCTTTTACCAGAATATCCTCAGTTGGCCTTTGGACAGTGTCTCTGGAGGGAGGCAATGCATCAGGCTATTTATCACCCAGCAGTTCCCGCAGTAATCAATTAGTCTTTCAGTGGGCGTACCTGGCCCCTCCGGCCTGGCACTACCTGTTACAAGCCTGCCTTCCTGGAATCGCAGGGCCTGAACTTCTCTCTTGTTTCTCTTTCTCCCTCCTTTCCTCTTCACTATCGCACAGTCGGCACACTGAGCGAGTGCTTGGGGTAAAATGGATCTGTTATCAGCAGATGCACCGCACAGCCTGTCTCACTTCAAACAAAGCTACTGGCAAGGGAGCGGCAGCAGCCCCTGTTTCCAGGGCCACTGGAGTTTCAAAGAAGTGAAAGAGGGCAGCAGTCTGGAGGCTACAGGGCCCAGGCTGGCATACTTGGCTAGCGTCGTGGCCAGGTTTATGGGGGCCCGAAATCAGGTTCTGTGGTTGTGTGAAATGCTCCCAGAACATATGGAGGAGGATTCGCCAAGCCCCGCTTCACAGCTGTCTGCACCCAGCGAAGACGTACCCTCCCTTTCCCTGCTCCATTGATGTACACACACACACCAAAGACCTCCAGAAAAACACACACACACACACATATATATATATAAATGCCAGTAAAATCATGAAATCATGCATGATCGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_01749399_01752421.mRNA True 907 mRNA 0.50 3 1748904 1752518

Neighbor

gene id symbol gene type direction distance location
CI01000030_01735473_01743982 NA coding upstream 4158 1734764 ~ 1744746 (+)
CI01000030_01733476_01734513 NA coding upstream 14241 1732804 ~ 1734663 (+)
CI01000030_01683292_01689297 NA coding upstream 59533 1682016 ~ 1689371 (+)
CI01000030_01636207_01648294 TM2D1 coding upstream 100301 1636207 ~ 1648603 (+)
CI01000030_01514203_01515696 PDZK1IP1 coding upstream 232429 1511645 ~ 1516475 (+)
CI01000030_01818694_01832525 NA coding downstream 63244 1815762 ~ 1832948 (+)
CI01000030_01835873_01839144 NA coding downstream 83002 1835520 ~ 1839180 (+)
CI01000030_01875455_01901837 NA coding downstream 122937 1875455 ~ 1902005 (+)
CI01000030_01902669_01906805 NA coding downstream 150151 1902669 ~ 1907231 (+)
CI01000030_01912241_01917759 RAB3C, RAB3B coding downstream 159723 1912241 ~ 1918777 (+)
G157649 NA non-coding upstream 230131 1493902 ~ 1518773 (+)
G157631 NA non-coding upstream 281049 1467222 ~ 1467855 (+)
G157572 NA non-coding upstream 470842 1277295 ~ 1278062 (+)
G157528 NA non-coding upstream 478645 1267594 ~ 1270259 (+)
G157853 NA non-coding downstream 68770 1821288 ~ 1821735 (+)
G157856 NA non-coding downstream 71186 1823704 ~ 1823918 (+)
G157857 NA non-coding downstream 74223 1826741 ~ 1827034 (+)
G157855 NA non-coding downstream 157686 1910204 ~ 1910604 (+)
CI01000030_01972795_01974531 NA non-coding downstream 222428 1972795 ~ 1975434 (+)
G157726 NA other upstream 110677 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 742217 1003114 ~ 1003795 (+)
G157227 NA other upstream 1392421 327649 ~ 356483 (+)
G157108 NA other upstream 1602051 116156 ~ 146853 (+)
G157076 NA other upstream 1731148 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 526595 2277208 ~ 2282743 (+)
G158416 NA other downstream 843358 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1260938 3018776 ~ 3043773 (+)
G159685 NA other downstream 2679282 4431800 ~ 4488526 (+)
G159816 NA other downstream 2764260 4516778 ~ 4517381 (+)

Expression


Co-expression Network