CI01000030_01835873_01839144


Basic Information

Item Value
gene id CI01000030_01835873_01839144
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 1835520 ~ 1839180 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_01835873_01839144.mRNA
ATATATAAAACATTCTGGGGTTGTATTTCAGGCAAAAACATTTTCAAAAAGAATTTTAATTTTTTTAAAAAAGGGTTTAAATATAATATAATATACATAAAAACCAGATGTACAATTTAAAATTGATAAATTATTGGGACAATTTACGGTTGTCAAATATTACTGAAACCTGTCCATAGTTTCTTCATCTACTAAAAATCACACTGAAATCAAAAAATGGCTCGGAAAAGTGAAGTTATATCTGAGAAAATGCACTTGCATTTCTTTGCAAATGGCACTGTAATGAAATGAATTCATTTTTAAGTGTGGCTTAAGTGTCCAAAATACGTTTTGGTGCTACTGTTTATTTCAGCATGATTGCCAATATAATAAATGTCAATGCCAGGTACTTGATGACTTGTTTTAGTCAATTTCAAGACATTTTAGTCATACAAGCAAACATCACGCACTGTGACTTCTACAACGGAAGGCGTGGTTCAGTGGTTACGGTCATAAATCAAAGAACTGAATGTTTGGAGATCACTTCAGATATTTTGGAGCAGCATAGACACACAGAGACGGGCTTAGATCGAAGAGAGGGGGAGAGAAAGAACAAACATTTGATAGCGCTGAATTGCGTTTTTAAAAGTGCTTTTCCGTCACCCATTGACAAATTAATTCCGACTCCATCAGTCCACGGTGGAGGCCAAATTAGAAACATCTTCCACTCCGACATAGCACACACTGCCCGGACAACAGGCGGCAAAAATGAGACGTTGTGTAAAACAAAGTGCCACAATAGATTTGTGTCAGGTTTTGTCATGTGGTCTTAGCGCTTTAAAGCATCGTTACGTTACGAAGTGTGTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_01835873_01839144.mRNA True 848 mRNA 0.36 4 1835520 1839180

Neighbor

gene id symbol gene type direction distance location
CI01000030_01818694_01832525 NA coding upstream 2572 1815762 ~ 1832948 (+)
CI01000030_01749399_01752421 NA coding upstream 83002 1748904 ~ 1752518 (+)
CI01000030_01735473_01743982 NA coding upstream 90774 1734764 ~ 1744746 (+)
CI01000030_01733476_01734513 NA coding upstream 100857 1732804 ~ 1734663 (+)
CI01000030_01683292_01689297 NA coding upstream 146149 1682016 ~ 1689371 (+)
CI01000030_01875455_01901837 NA coding downstream 36275 1875455 ~ 1902005 (+)
CI01000030_01902669_01906805 NA coding downstream 63489 1902669 ~ 1907231 (+)
CI01000030_01912241_01917759 RAB3C, RAB3B coding downstream 73061 1912241 ~ 1918777 (+)
CI01000030_01920523_01930701 NA coding downstream 81343 1920523 ~ 1931000 (+)
CI01000030_01932035_01939204 AXDND1 coding downstream 92855 1932035 ~ 1939920 (+)
G157857 NA non-coding upstream 8486 1826741 ~ 1827034 (+)
G157856 NA non-coding upstream 11602 1823704 ~ 1823918 (+)
G157853 NA non-coding upstream 13785 1821288 ~ 1821735 (+)
G157649 NA non-coding upstream 316747 1493902 ~ 1518773 (+)
G157855 NA non-coding downstream 71024 1910204 ~ 1910604 (+)
CI01000030_01972795_01974531 NA non-coding downstream 135766 1972795 ~ 1975434 (+)
G158441 NA non-coding downstream 237346 2076526 ~ 2083232 (+)
G158412 NA non-coding downstream 246858 2086038 ~ 2090083 (+)
G158439 NA non-coding downstream 257314 2096494 ~ 2174147 (+)
G157726 NA other upstream 197293 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 828833 1003114 ~ 1003795 (+)
G157227 NA other upstream 1479037 327649 ~ 356483 (+)
G157108 NA other upstream 1688667 116156 ~ 146853 (+)
G157076 NA other upstream 1817764 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 439933 2277208 ~ 2282743 (+)
G158416 NA other downstream 756696 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 1174276 3018776 ~ 3043773 (+)
G159685 NA other downstream 2592620 4431800 ~ 4488526 (+)
G159816 NA other downstream 2677598 4516778 ~ 4517381 (+)

Expression


Co-expression Network