CI01000030_02025674_02036478


Basic Information

Item Value
gene id CI01000030_02025674_02036478
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2023299 ~ 2037947 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02025674_02036478.mRNA
GTATATAGAACATCTGGGGCACTTTATTAACCAATCCGCATTCAAGAGCAAAACCAAAGGATTCTACAACTAGAATGGTTTCGTTTTTTTTTTTTTTTGACTCAAACTATTTTCCCACATTTATCTGCTACAAATGAAAGCTGTTTGAATTCAATCTTAAACTATGAAAATTACTGTAAAGTACAAAGATTTTTTTTTTTTTTTTTATACAAAGTTGCCATTGCCATCGCCAGCATTTTTGATCATTTTTACAAAAGGTTTATAGCCCCTAGATTATTTTGTTGTATGAGTATCTTAGCATACAATATATCAAAGGAAAGAACAGAGCCTCTGATTAAAAAAAAAAAAAAAAAAGGCAACATTTTGAACATAAAGCTGAGAAAATCATGTTTTTGTCAAAGACTATGTCTGGATTGGATTCAGAATGATAATCAAAACATAGATGGAGTAGAACGAGTCCATCAACACCCCCAAAGCTTGCACAGTCCTATACCTCTTCCTGGGTTGACATTTCATTCGATAACATCAGGTAGTTTTGTTTTGTGTGCTGTTTAATATTTGATGATCGCGTTAGCTTACATATGCATAAGCAATCTTCTGTCGCTTGTTTATGCTTCTTTGCTTGTTTTTGGATCTGGAGAGTCTGTACTCTTTCAGAATGTGCATAATAGCGCCCCCTACTGTATAACAGTGAAAACTGTTTGTTTGGATTGCTGGAAAATTCCGTCAATGGCGGGGAAACATTTAAAGGGTTAAGGCTGATTTATACTTCTGCGTCGAGTGTACGCCGTAGCTACGGCGTAGGCTGTGTGTGCGTAGCCTACGATGTAGCCTGACGTGCACCTCTTCAAAAATGTAACAACGCATCAATTTCTACACGGACCACAAGCGCTGTGATTGGTCTGCTAAAACCCCTCCCTCAGGTCAAAAAACTGGCGCGGAGCAATCGGAGAAGAGCGAGCGTTTTCAACTTCCATATGAATGAAAAAACACTCTGTTTCAGGGGACACATTCAGTCAAACTGCAACAAAAGTCGTTACCTATTTGCCGCTTCTCTGTCGCTTCTATTTGTAAGCTTCTCTGACAACGTACATGACAAGCTGCTTCTTCTTCGGCTTTTGCCTTGATCCTCAACATGACCGCGCACACTGCCTCCTAGTGGTCTGCATGCACGTCGACGTGGACAACGACGCAGAAGTATAAATGAAAACAGATGCATAGCCTACGGCGCAGAGGCTCTTGTGTAGGTCCAACGCAGAAGTATAAATCAGCCTTTAGTTCACCCAAAAATGAAATTTCTGTCATTAATTACTAACCCTTATGTCGTTCCAAAACCGTAAGACCTTCGTTCATCTTCAGAACACAAATTAAGATATTCTTGATGAAATCCAAGAGCTTTCTGACCTCCCTATAGACAGCAATGTCATAACCAATTTCAAGGTCCAGAAAGGTAGTAAAGATATCTTTAAAATAGTCCATGTGACTACATTGGTTCAACCTTAATGCTATGAAGCGACAAGAATACTTTTTGTGCGCAAAAAAAAAAAAAACTTTATTCAACAATTTCTTCTCTTCCCTGTCATTATCCTATGCTGTTGACGTAGTAAACACAAAGGAGAATGAGAAGGAAACACCTTAGTCACATGGACTATTTTAACGATGTCTTTACTACCTTTCTGGGCCTTGAAATTGGTCATTGGTCCCTGTCTATAGGGAGTTAAGAAAACTCTTGGAGGTCTTACGGGTTTGGAACGACATGAGGGTTAGTACTTAATGACAGAAATTTCATTTTGGGGTGAACTAACCCAAGCACATGAAAAACCACTTTGATGATGGTCATCCTTTATGATTGGGATTCCATCCCTGTACCAAATTTCAAAAAGTGGTTTAACTGATAGTGTTACAGCCATTCCTGGTCCTCCCATATTAGTTTTGCTCACAGCTCTGTTCCCAGTGGCATTAACCTAAGAAAAACTCTTCCTTTTGTTAACCCTACCCGGATTAATCTGTTCATCTGTAATGAAGCTGCATAATGGTTTTTGATGTATTATGCAATACGGCACAAAGATCCCACACAGATGATTAGCGATATAGCCGTGAGGTCTGAGGATTCTCCGACTCTGTCCTGCTGCCCCTGACCCACTCATGAGCAGCTGAATGGCCCGCGGTCTGTTGATGGTAACATTCACTGACAGCTGTCCACTCCTCACTATTAGGCTGGTCGCATGCCCATCCGAGAATACCGCCATCTGTCCGTTTGTACATGCTGGAGCTGAGGAATTTTGGGAGGTTGGGGAGGAGCCTTTTTTTTTTTCTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTCATGACCATGGTTTCCAAAGCTGAGATGGTTTTCCATCATGCCATTGCAGCTCCCTCAGGAGTGAACCCAGCTGTTCAGTCCTGGCAGCTCATGCAGACCTGCCATCCCCAGCATGCAGGCTCCAAACTTGGCATGTCTTCACACTTACTTCCCCCATTCTCTCAGCGCCCTTTCCTGTCCTATCTCTTTGGATATGGGGCTTTCAGGTGGTTGTTGCTAGACTGTTACGACATCTGGTGCCACAGTGGAGGCAGGAGATCTCCAGATGTTCCTGTGAACGATAAGGGAGAGGAAGAAAGGAGGAGGTGGAGTTGGAGGCATCATGAGTTGACGGAGCAGATTCGGATCCCCGTAGTAACATCTACTGCTCCACTTGGAGCAGATTCGGTTTTTGATAGCGCATCACGGCACTTATATACTCTCTCCTCCTGGTGTCACATCCGAGAAATAGGTCAGCTCGCCCCGGGTGGGGCTCTGGCGACAGCCGCTTTGTTGTCAGACCGGCACAAGATCGGCGCTGACTGGCTTAGAACCCAGTGGGAGGCCCGGCACAAACTTCAGAGGCTCTTTCGCACTGTGTGCCCACCTCGGAAAGTTCTAGAGTGACTGAGCGAGCCTGACGGCAGCTTCTCGGAGACAGCGCGCCTGTCTCACTCACTGCGCCTCCACACCAGCTTGTCATGCTGCATCTCTCAGTCCAGCTTGCACTAATGTTGTTTGCTGTCATCTCGGATTTCAGAGTGACTCACTCTGTTCTTGCGGGAGACTCTGCTTGGAGCTTTTAGCCTCGGTGTTGCTGTGACCGAACCGACCGGCTTTCAGAGTTCTAGGACGCGCTGAGGTACAGTACTGCCTGTCATTTTGAGGCGTTAACGAGATGAGCGAAAGCCCTGAGAGCTTCAGGGTGAAATGCACTGTGGAAAGAACACATCTGTTGATGCCCTTTTGTGGCAGCTCATTTGTTGGGCCCAATTCACACAAGGCAGCATGTCAAACTGTACTAAGCATATAGTTCCTCTCATTTTTATTAGTGTGATACTAGGTGATACCCAATCTTTAGTCTTTCTAGAAAAGCAATTGCTTTAAATGATAACGTTCATTAATGATATTTATTATTGTAGTTTTTTCATTTATATAGAATTTTATTTGTAGTATAGAATCGTAATATCCATTTTTCAAACTGTACATTAATGTGTTGGCTGTAGCATTTAAAATGATGTTGATTTTTGTTTTTAGTGTTTATTTTTATTACATCATTCAATAATGTAAATTATAAATTAATTACTTATTAATTTAATTAATTTTTATGTTTCTTTTTTTTTTTTTTTTTCATGTTTTAGGTGTAACTTTTAACATATTATTCAGAATTTCAATTATTTATAGCATAGAATTTTAATATTGGCCATCACTAATAATTTATTAAAGGGATAGTTCACCCAAAAATGAAAATTAGCCCATAATTTACTCACCCTCCAACCCATCTTAGTTGTATATGACTTTCTTCTTTCAGCCAAACACAATCAGAGTTATATTAAAAATATTCTGGCTCGTTCAAGCTTTATAATGGCAGTGATTGGAGGATGAGATTTGGAAGTCCAAAAAAGTGCATCCATCGATCATAAAACATGCTCCACATGGCAAATATCCTTATTTAAAACTTTATAAAGTAAAATAACAAGCTTCCAGTGCAACAGCCATACGCATTCGACTTAAGTCCAAAAAGCCTAAACTTCCGCGACGTAGTACACAATGACATGATGTTCTATGCTGCACCATGATGTACTACTATGTCCTACATTATAACGTGTAGTACGCCATGTCATTGTGAGTAAATTATGGGATAGTTTTCATTTTTGTGTGAACTATCCCTGTAACACTGTTAAATGTAATCTCTGTAAATTAACTGTTTAAAACCATTGATTTTTAGTTTTCACTAAAATTTTGATTTAACATTGGCCATTTACCAGTTTATACATACCTGGGGATTGAACCCATAACCTTTACGTTGCTAGCTAGTGCCTTGCTCTGCTGGTTTAGTTTCATGAGGACAAACCCAGGATACTTGCATCCTTCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02025674_02036478.mRNA True 4450 mRNA 0.41 4 2023299 2037947

Neighbor

gene id symbol gene type direction distance location
CI01000030_01985397_02017638 GPR52 coding upstream 5105 1985397 ~ 2018194 (+)
CI01000030_01972795_01974531 NA coding upstream 47865 1972795 ~ 1975434 (+)
CI01000030_01945306_01955404 NA coding upstream 67895 1945306 ~ 1955404 (+)
CI01000030_01932035_01939204 AXDND1 coding upstream 83379 1932035 ~ 1939920 (+)
CI01000030_01920523_01930701 NA coding upstream 92299 1920523 ~ 1931000 (+)
CI01000030_02039525_02050052 RABGAP1L coding downstream 351 2038298 ~ 2050230 (+)
CI01000030_02058151_02072387 RABGAP1L coding downstream 19900 2057847 ~ 2072510 (+)
CI01000030_02094695_02098284 RAB11B.2.L, RB11B, RAB11B.1.S, RAB11B.2, RAB11B.1, RAB11B, RAB11BA, RAB11BB coding downstream 56748 2094695 ~ 2098757 (+)
CI01000030_02104123_02108608 MARCH2.S, MARCH2 coding downstream 66176 2104123 ~ 2109882 (+)
CI01000030_02113302_02119860 HNRNPM coding downstream 75010 2112957 ~ 2120066 (+)
G157855 NA non-coding upstream 112695 1910204 ~ 1910604 (+)
G157857 NA non-coding upstream 196265 1826741 ~ 1827034 (+)
G157856 NA non-coding upstream 199381 1823704 ~ 1823918 (+)
G157853 NA non-coding upstream 201564 1821288 ~ 1821735 (+)
CI01000030_01683292_01689297 NA non-coding upstream 338831 1682016 ~ 1689371 (+)
G158441 NA non-coding downstream 38579 2076526 ~ 2083232 (+)
G158412 NA non-coding downstream 48091 2086038 ~ 2090083 (+)
G158439 NA non-coding downstream 58547 2096494 ~ 2174147 (+)
G158397 NA non-coding downstream 67455 2105402 ~ 2159275 (+)
G158487 NA non-coding downstream 220279 2258226 ~ 2258504 (+)
G157726 NA other upstream 385072 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1016612 1003114 ~ 1003795 (+)
G157227 NA other upstream 1666816 327649 ~ 356483 (+)
G157108 NA other upstream 1876446 116156 ~ 146853 (+)
G157076 NA other upstream 2005543 12878 ~ 17756 (+)
CI01000030_02277208_02282376 TM6SF2 other downstream 241166 2277208 ~ 2282743 (+)
G158416 NA other downstream 557929 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 975509 3018776 ~ 3043773 (+)
G159685 NA other downstream 2393853 4431800 ~ 4488526 (+)
G159816 NA other downstream 2478831 4516778 ~ 4517381 (+)

Expression


Co-expression Network