CI01000030_02256592_02257308


Basic Information

Item Value
gene id CI01000030_02256592_02257308
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2256530 ~ 2257589 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02256592_02257308.mRNA
GTATAAATAAGAGTTTGTTTGACGAGTCGTCACATCTTTTTTGTCTTCCCTGTTCATTAAGTATGGCTCTAGTGCACAGCAGCGTTCTACTTCAGGCGTTGTCTAGCTTCACAGGTGTTGCCGTGAAGGCTTACACCGATTTGGAAAAGCCAAAGGGTGATGAGCTCACAAGTTTCCTACTCCAAGCCTCAACGCCACTGGAAATTCTCAACACAGGTTCATGCAAGGAGCTATTTGTGAATATGGACAAATTCTTTGACCGAAAGTTTGATTATGATTGCACAAATATAAAAGATGACACCGCTTTTACACGTGGGAATGAACCATACATCCGCCCTTATGGGTGGAAACGCATTGCTTTGAAAGTCCTGGATAAGTATCCCAATGGAAATGCCTGGTTGGGCACGGATGGATGGAGGAGTCACTCTGTGGATGGTGAGTGGCCTGTATCCTATCATGGAACCAGCATGATTGGGGCTAAATCCATCATTGAATCCAACTACGAAGCAGGCCTTAGAGAACTGTATGGAAGAGGGATTTATTCCACCAACGATATCAACGTGGCTGAAAGATACAGCAAGATATTTACATGTGAAAAAACCGGAAAAAGATATAAAGTCTTGTTGCAGAACAGAATCAATCCGAAAATGCGGAAAGTGTGCAGAAAAAGCCAGGACTATTGGCTGATTGAGATTCCTCATGGCACTAATCACGAAAATGAAAAAGCGATTGTGGAGAACGCGATTCGGCCTTATGGAATGCTGCTGAAAGAGGTGTAAGGGAGGAATTCTGACAACCATCGCATCAACCTTGATGGGGTTATGTGAACATTTACTGCTTGTGGGATCATATTAATTAAAAATGTCATTAGGCCTATTTCTGGTTATTTCTCTGTTAGACTTAAATAGCTGGGAGGATTTGTGCTTCTTAAATTATGTGAGATGTTATTTTCTTGTATGCTTTTAGTTTGTAGTCAGGCAATTCAGGGTAAGATATTAAATATGGGAAGAGGGACACACAATATACTTGAAATTGTACTTGATTTTCACACTCTGGATAA

Function

NR:

description
hypothetical protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02256592_02257308.mRNA True 1060 mRNA 0.41 1 2256530 2257589

Neighbor

gene id symbol gene type direction distance location
CI01000030_02161055_02163914 POLR2E coding upstream 92616 2160763 ~ 2163914 (+)
CI01000030_02113302_02119860 HNRNPM coding upstream 136464 2112957 ~ 2120066 (+)
CI01000030_02104123_02108608 MARCH2.S, MARCH2 coding upstream 146648 2104123 ~ 2109882 (+)
CI01000030_02094695_02098284 RAB11B.2.L, RB11B, RAB11B.1.S, RAB11B.2, RAB11B.1, RAB11B, RAB11BA, RAB11BB coding upstream 157773 2094695 ~ 2098757 (+)
CI01000030_02058151_02072387 RABGAP1L coding upstream 184020 2057847 ~ 2072510 (+)
CI01000030_02260437_02262817 NA coding downstream 2791 2260380 ~ 2262817 (+)
CI01000030_02277208_02282376 TM6SF2 coding downstream 19619 2277208 ~ 2282743 (+)
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding downstream 31911 2289500 ~ 2292428 (+)
CI01000030_02423347_02426071 NA coding downstream 165179 2422768 ~ 2426301 (+)
CI01000030_02452403_02456555 NR2C2AP coding downstream 194814 2452403 ~ 2456871 (+)
G158439 NA non-coding upstream 82383 2096494 ~ 2174147 (+)
G158397 NA non-coding upstream 97255 2105402 ~ 2159275 (+)
G158412 NA non-coding upstream 166447 2086038 ~ 2090083 (+)
G158441 NA non-coding upstream 173298 2076526 ~ 2083232 (+)
CI01000030_01972795_01974531 NA non-coding upstream 214473 1972795 ~ 1975434 (+)
G158487 NA non-coding downstream 637 2258226 ~ 2258504 (+)
G158488 NA non-coding downstream 1640 2259229 ~ 2259454 (+)
G158490 NA non-coding downstream 3964 2261553 ~ 2261843 (+)
G158508 NA non-coding downstream 46908 2304497 ~ 2312470 (+)
G157726 NA other upstream 618303 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1249843 1003114 ~ 1003795 (+)
G157227 NA other upstream 1900047 327649 ~ 356483 (+)
G157108 NA other upstream 2109677 116156 ~ 146853 (+)
G157076 NA other upstream 2238774 12878 ~ 17756 (+)
G158416 NA other downstream 338287 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 755867 3018776 ~ 3043773 (+)
G159685 NA other downstream 2174211 4431800 ~ 4488526 (+)
G159816 NA other downstream 2259189 4516778 ~ 4517381 (+)

Expression


Co-expression Network