CI01000030_02260437_02262817


Basic Information

Item Value
gene id CI01000030_02260437_02262817
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2260380 ~ 2262817 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02260437_02262817.mRNA
TTATAAAAATCACCCTGTGCACTGTGGACACAGATGTCACGGTCCTAGCCATTACACATGTCAGAGCTGGACATTGAGGAGATGTGGGTGGCATTTGGAACTGGCAAGAACTTCAGATACATACCTGCCCATGAGACTACCAAGTCTCTGGGTCCTGACAAATCCAAGACCCTTTCTGTGTTCCATGCCTTCCCTGGCTGTGACACAGCATCTACATTTGCAACCAGGGGCAAGAAGACAACAGAGGATACTTGGACTGCAGATGACATGACAACAGAGGCCTTCAATGCCCTGTCAAAGGCTCCAAAAAGCATTCCAGAAGAGGTGATTTCCATTATGAACCACTTCACAATTCTCCTCTATTATCACACCAGCAGTCAACTCAACATCGATCAAGCTCATCTTGCGTTGTTCACAAAGAAAGGAAGAGGAATGGAACAAATCCCCTCATCTAAGGATGCACTGGTGCAGCACCTCAAAAGACCAGTTTACCAAGGAGGACACTGTTGGGGACAAGTATTTGAGGTGGCACCAAATATGCCATCTCAGTTCGGGGTTGGATGGACCCAAGCGATTGAAGACCATTGTGGTCAACACTTCCACAGGCAAGCTAGTCCACTCCTAAGTTGTGGCTGCAATACAAAAAAAGCCTCCTTAAAATGCACAGCTCTGTGTCAATGTAGAGTTTATGATGTTTTATATGGTATCATTGTAATCCTTGACCATCAAAACATAGGGGTAGACATCACTTTTTCTGTGTTATCATGTTTGATTCAGAAGATAAGTTACAAAATACATACTTGGGTTATGGCAGAAAGTAAAATGGTTGCCATGGTGACCACGAGGCGTTTTTGTGATGGCTCCATTTCTGAAAATGTTCAGGGCCCCAAACTGTACAAGTGTACCAAATTTCATGCTTTTATGAAAAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02260437_02262817.mRNA True 933 mRNA 0.44 2 2260380 2262817

Neighbor

gene id symbol gene type direction distance location
CI01000030_02256592_02257308 NA coding upstream 2791 2256530 ~ 2257589 (+)
CI01000030_02161055_02163914 POLR2E coding upstream 96466 2160763 ~ 2163914 (+)
CI01000030_02113302_02119860 HNRNPM coding upstream 140314 2112957 ~ 2120066 (+)
CI01000030_02104123_02108608 MARCH2.S, MARCH2 coding upstream 150498 2104123 ~ 2109882 (+)
CI01000030_02094695_02098284 RAB11B.2.L, RB11B, RAB11B.1.S, RAB11B.2, RAB11B.1, RAB11B, RAB11BA, RAB11BB coding upstream 161623 2094695 ~ 2098757 (+)
CI01000030_02277208_02282376 TM6SF2 coding downstream 14391 2277208 ~ 2282743 (+)
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding downstream 26683 2289500 ~ 2292428 (+)
CI01000030_02423347_02426071 NA coding downstream 159951 2422768 ~ 2426301 (+)
CI01000030_02452403_02456555 NR2C2AP coding downstream 189586 2452403 ~ 2456871 (+)
CI01000030_02466855_02469633 NA coding downstream 203768 2466585 ~ 2470573 (+)
G158488 NA non-coding upstream 926 2259229 ~ 2259454 (+)
G158487 NA non-coding upstream 1876 2258226 ~ 2258504 (+)
G158439 NA non-coding upstream 86233 2096494 ~ 2174147 (+)
G158397 NA non-coding upstream 101105 2105402 ~ 2159275 (+)
G158412 NA non-coding upstream 170297 2086038 ~ 2090083 (+)
G158508 NA non-coding downstream 41680 2304497 ~ 2312470 (+)
G158548 NA non-coding downstream 163677 2426494 ~ 2426775 (+)
G158555 NA non-coding downstream 184192 2447009 ~ 2447452 (+)
CI01000030_02531026_02532411 NA non-coding downstream 247984 2530509 ~ 2534232 (+)
G157726 NA other upstream 622153 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1253693 1003114 ~ 1003795 (+)
G157227 NA other upstream 1903897 327649 ~ 356483 (+)
G157108 NA other upstream 2113527 116156 ~ 146853 (+)
G157076 NA other upstream 2242624 12878 ~ 17756 (+)
G158416 NA other downstream 333059 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 750639 3018776 ~ 3043773 (+)
G159685 NA other downstream 2168983 4431800 ~ 4488526 (+)
G159816 NA other downstream 2253961 4516778 ~ 4517381 (+)

Expression


Co-expression Network