CI01000030_02423347_02426071


Basic Information

Item Value
gene id CI01000030_02423347_02426071
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2422768 ~ 2426301 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02423347_02426071.mRNA
GGATAAATGCAGGCATAAATTAAGACATTTACAGACTGCCAACTTTGCATAATTAAACACAGCCTTTGTCACGTTTTCGTCACAAAGGAAGCAGTCAGCATTCTTCAGCGTAACTTATGCACAAACACAAAACTAGCATGAAGTTTCCCTAAATTGCATCTAGCAAAAATTTCCTGAGTAATTTTAGGAGACTTGGTCCATTAAGCATGGAGCATGCTAATTTACGACAAGGACATTATCTCCAGGAATTCAAAGGCATTTAGCTGTCTGGATGCTATTCAAGTACAATTTCAATTCCACCTGTCAGCCCAGCCCCCCCTCATATGATTGTTGGCACTAAACTACGCAGTCGAGCGGAAACGCGCATTATTAAAATGTGAGAATCAATCAAGTGCCCTCTAAAAGTCACCCAACGCCAAAACGGTTGCGCTCCAAGGCAATTTCCACTTTTTCTTCAAGAGACAACATGCTCAGAGGTGCTCCGCTGGCATTTATGATTATACAGGGAGAAGAAGAGGGCGCTCAGATAAAGAGCAGAATGGATGCCCCAAGGAGATATACCGAGGTTCTGAAGCCAACATGAAAGGCTGCTTGGCTTGGCAAGCCTGCGCTGCTCCACTGGGACTTAAGGGTTGGAAAGAAAGGTCTTTGAACCTGGAAGCGCCGTATCGGAGCACTCACCCTGATATAGCTGCAACCAGCACAGGGTTGCTTGAGGGTGACAGGCATCAAGACTTGTTGCAGACTGATGCAAAAAGCACCTGGTGTGCTCCGTCAGCGCTCGCGCAGAGAAGAGCTCGAAACGGCGCGCACTTCGCCGGTCGCGAGGAGACACTGAACAAAAGCGCGTGCGGAGGCTCACAGCGTTTCCCCCCTCACCTCACCTCACCAAAAAGAACGGAGCAGATGCTGAGGCAAGAGTGTGCGTTAGATGGTAACGTTATAGCCAATTCTCTGTGGACTTCGATGAATAAATCATCTCAGCGTCACGAGGAGCCTTTAGAAAAAGCTCTGAAAAACCTGACCTGCCCCCTGTTTTATGACAGAATAATGATGTCCCTCGAGATGCTGCAAATCTGTTCCTAGAGGCCACGCCGTGGTCCACTGACACACATTTCACCCGACCCACAGAAGCCCACTCACTTAACACTACCCCCAGTTCAGTCATTCAGCACATTTATCACTGTCATTCGATTACAGATGTTACTGTGTAAACAAATCACAACAAACCGCAAAGCCTCTTCTCAGTGTTCCTGTTGTGATGCTGCATCCCATAATGAGCATAGCAGCTTTTCCTGCCCAGTCTATGGTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02423347_02426071.mRNA False 1316 mRNA 0.47 4 2422768 2426301

Neighbor

gene id symbol gene type direction distance location
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding upstream 130340 2289500 ~ 2292428 (+)
CI01000030_02277208_02282376 TM6SF2 coding upstream 140025 2277208 ~ 2282743 (+)
CI01000030_02260437_02262817 NA coding upstream 159951 2260380 ~ 2262817 (+)
CI01000030_02256592_02257308 NA coding upstream 165179 2256530 ~ 2257589 (+)
CI01000030_02161055_02163914 POLR2E coding upstream 258854 2160763 ~ 2163914 (+)
CI01000030_02452403_02456555 NR2C2AP coding downstream 26102 2452403 ~ 2456871 (+)
CI01000030_02466855_02469633 NA coding downstream 40284 2466585 ~ 2470573 (+)
CI01000030_02472528_02477483 NA coding downstream 46227 2472528 ~ 2477483 (+)
CI01000030_02531026_02532411 NA coding downstream 104208 2530509 ~ 2534232 (+)
CI01000030_02573116_02582804 GATAD2A coding downstream 146815 2573116 ~ 2582812 (+)
G158508 NA non-coding upstream 110298 2304497 ~ 2312470 (+)
G158490 NA non-coding upstream 160925 2261553 ~ 2261843 (+)
G158488 NA non-coding upstream 163314 2259229 ~ 2259454 (+)
G158487 NA non-coding upstream 164264 2258226 ~ 2258504 (+)
G158439 NA non-coding upstream 248621 2096494 ~ 2174147 (+)
G158548 NA non-coding downstream 193 2426494 ~ 2426775 (+)
G158555 NA non-coding downstream 20708 2447009 ~ 2447452 (+)
G158436 NA non-coding downstream 226343 2652644 ~ 2653106 (+)
G158434 NA non-coding downstream 228974 2655275 ~ 2655548 (+)
G157726 NA other upstream 784541 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1416081 1003114 ~ 1003795 (+)
G157227 NA other upstream 2066285 327649 ~ 356483 (+)
G157108 NA other upstream 2275915 116156 ~ 146853 (+)
G158416 NA other downstream 169575 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 587155 3018776 ~ 3043773 (+)
G159685 NA other downstream 2005499 4431800 ~ 4488526 (+)
G159816 NA other downstream 2090477 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4773634 7200104 ~ 7202485 (+)

Expression


Co-expression Network