CI01000030_02466855_02469633


Basic Information

Item Value
gene id CI01000030_02466855_02469633
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2466585 ~ 2470573 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02466855_02469633.mRNA
CTATATAAAATAAATACAATATACTATAATACACAGTATTTAAAAAAAAAAACTTCATCAGCAGCAACAAATGACTTTTTTTATTTCTATTTTTCTAAAGCTAGTTTTTCTTATTTTACGACTATAAACTTTCTAGAATACTTTTTTCCCCTCATTCAATGGGTTTGAGTAAAATGGGCCAATTTGCATGACAAGTTCACCATAAAACAGTGCATATTCACAGCATCCACAAAAATATGTATATATAGAGAATCATTATTTTGCACAAAAATGAACTACATGACAAGAAAGATTGATTGGGAAGAATGGTTAGACCAGAGTCTGAGAGCACTAAGGTGTAAAAGCATTAAGAGCATCAAACGCCAATTAAACTCGACAGAGGCGGGTGCAAAACTCAGAAGCAGTCGGCTGCTGCTTACGGTGAAAACAGGCGGAGATGATGGGCGTCTCTTTCAGCCAATGGGAACGCCAGAGGGGAGTGCCATTTTCCTGCATGGTGACGCTGCTGTAGGAACAGCTGGAGACGATTGGCGTCTCTTTCAGCCAATGCAAACGCTGAGAGGGCGTGGTTTTCTCTGCAAGATGCTGCTACAGTATGAACAGCTGGAGATGAGCTGTTGTCAAAAGCGCTCGACGATCATCAGACTGGTGACGCTGTTCTTAACGACTCAACCGACTGTTTAATTGTCAAAACCAGGTAAAATATATTGTTGTTTTCAAATCTATTTATATATAGGCTAACTATATAACTGTTTAGCTAACTATAGTTTTGCGTTTAGTCTTACATATGAGTCACCCTGGAATAGGAAAGTTATTGGCCAAGTTGAACTATTTATAGAAGTATTGATATTTATAATAATAATAATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATACACACACATATATATAATTTATTTATATTTCATGCACACATGAATATATATATATATATATATATATATATATATATATATATATTGCATAATATTTTATATCAAAATAAAATCATAGTTAAATAAATAAATATATACAATTAAATATCTGAAGCATAGAACATTAGCACAAAAAACAAGGCCTTTCATTCGCTCACTAGTTTTAATCAAGCCACCATCGGTGTGTCACCTTGAGAATGTGAGAAACTAACGCAGAATGCTTTATTTATTACATAAAGTGTTATTAACGCTTTTTTCTCAACACACTGGTTTAGTGCAGATTTACCATTTTAGTGTTATTTCAAGATGTTTATTCTTTTGGGATATGCAATTATATTTATTGATTTTGCAGATTATTTATTTATTTATTTATTTATTTTGCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02466855_02469633.mRNA True 1624 mRNA 0.26 4 2466585 2470573

Neighbor

gene id symbol gene type direction distance location
CI01000030_02452403_02456555 NR2C2AP coding upstream 9714 2452403 ~ 2456871 (+)
CI01000030_02423347_02426071 NA coding upstream 40284 2422768 ~ 2426301 (+)
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding upstream 174157 2289500 ~ 2292428 (+)
CI01000030_02277208_02282376 TM6SF2 coding upstream 183842 2277208 ~ 2282743 (+)
CI01000030_02260437_02262817 NA coding upstream 203768 2260380 ~ 2262817 (+)
CI01000030_02472528_02477483 NA coding downstream 1955 2472528 ~ 2477483 (+)
CI01000030_02531026_02532411 NA coding downstream 59936 2530509 ~ 2534232 (+)
CI01000030_02573116_02582804 GATAD2A coding downstream 102543 2573116 ~ 2582812 (+)
CI01000030_02620111_02632697 YJEFN3 coding downstream 149538 2620111 ~ 2632722 (+)
CI01000030_02641511_02650047 CILP2 coding downstream 170472 2641045 ~ 2650539 (+)
G158555 NA non-coding upstream 19133 2447009 ~ 2447452 (+)
G158548 NA non-coding upstream 39810 2426494 ~ 2426775 (+)
G158508 NA non-coding upstream 154115 2304497 ~ 2312470 (+)
G158490 NA non-coding upstream 204742 2261553 ~ 2261843 (+)
G158436 NA non-coding downstream 182071 2652644 ~ 2653106 (+)
G158434 NA non-coding downstream 184702 2655275 ~ 2655548 (+)
G158566 NA non-coding downstream 186400 2656973 ~ 2657187 (+)
G158567 NA non-coding downstream 187689 2658262 ~ 2658521 (+)
G157726 NA other upstream 828358 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1459898 1003114 ~ 1003795 (+)
G157227 NA other upstream 2110102 327649 ~ 356483 (+)
G157108 NA other upstream 2319732 116156 ~ 146853 (+)
G158416 NA other downstream 125303 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 542883 3018776 ~ 3043773 (+)
G159685 NA other downstream 1961227 4431800 ~ 4488526 (+)
G159816 NA other downstream 2046205 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4729362 7200104 ~ 7202485 (+)

Expression


Co-expression Network