CI01000030_02472528_02477483


Basic Information

Item Value
gene id CI01000030_02472528_02477483
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2472528 ~ 2477483 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02472528_02477483.mRNA
GTGTGTGTGTTTGTGGGTGTACGGAGAATATCATACTGGTATTCTCTTTATATGGTTATAATGGCGCAAAACAAGGATTCCTCAACTTGTCTGCCTGTGTGCCAAGGGAAAAAAACCCCGTTCCGAACACAAAGCATCATGGGGCGGAAGAAAATACAGATATCTCGGATTCTTGACCAGCGAAATCGACAGGTGACATTTACCAAGCGCAAATTTGGGCTGATGAAAAAGGCCTACGAGCTGAGCGTGTTGTGCGACTGCGAGATCGCTCTCATCATCTTCAACAGCACTAACCGTCTTTTCCAGTACGCCAGCACTGATATGGACAAAGTTCTGTTAAAGTACACCGAATACAGTGAACCTCACGAGAGCCGTACAAACACTGACATACTGGAGGCTCCATCACTCCTCCCTTCAGAAGTTATGGGTCCAAGTACTGAAAACGGCTACAGCAACTCCTCCAATCCAAACCTAGGTGCCCATCGGACTCCGTCCTACAAACCTTTGTGCACCAGGCCGGGCTCAACCGGTTCTGTCAGCTCCAACTCTCATCCAGCTCTCATGGGACCACATGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02472528_02477483.mRNA True 577 mRNA 0.49 4 2472528 2477483

Neighbor

gene id symbol gene type direction distance location
CI01000030_02466855_02469633 NA coding upstream 1955 2466585 ~ 2470573 (+)
CI01000030_02452403_02456555 NR2C2AP coding upstream 15657 2452403 ~ 2456871 (+)
CI01000030_02423347_02426071 NA coding upstream 46227 2422768 ~ 2426301 (+)
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding upstream 180100 2289500 ~ 2292428 (+)
CI01000030_02277208_02282376 TM6SF2 coding upstream 189785 2277208 ~ 2282743 (+)
CI01000030_02531026_02532411 NA coding downstream 53026 2530509 ~ 2534232 (+)
CI01000030_02573116_02582804 GATAD2A coding downstream 95633 2573116 ~ 2582812 (+)
CI01000030_02620111_02632697 YJEFN3 coding downstream 142628 2620111 ~ 2632722 (+)
CI01000030_02641511_02650047 CILP2 coding downstream 163562 2641045 ~ 2650539 (+)
CI01000030_02678940_02684491 NA coding downstream 201457 2678940 ~ 2684591 (+)
G158555 NA non-coding upstream 25076 2447009 ~ 2447452 (+)
G158548 NA non-coding upstream 45753 2426494 ~ 2426775 (+)
G158508 NA non-coding upstream 160058 2304497 ~ 2312470 (+)
G158490 NA non-coding upstream 210685 2261553 ~ 2261843 (+)
G158436 NA non-coding downstream 175161 2652644 ~ 2653106 (+)
G158434 NA non-coding downstream 177792 2655275 ~ 2655548 (+)
G158566 NA non-coding downstream 179490 2656973 ~ 2657187 (+)
G158567 NA non-coding downstream 180779 2658262 ~ 2658521 (+)
G157726 NA other upstream 834301 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1465841 1003114 ~ 1003795 (+)
G157227 NA other upstream 2116045 327649 ~ 356483 (+)
G157108 NA other upstream 2325675 116156 ~ 146853 (+)
G158416 NA other downstream 118393 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 535973 3018776 ~ 3043773 (+)
G159685 NA other downstream 1954317 4431800 ~ 4488526 (+)
G159816 NA other downstream 2039295 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4722452 7200104 ~ 7202485 (+)

Expression


Co-expression Network