CI01000030_02531026_02532411


Basic Information

Item Value
gene id CI01000030_02531026_02532411
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 2530509 ~ 2534232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_02531026_02532411.mRNA
GTACATAAAGGAATGTCCTAATTTGCATGAGAATGGGCATCCAAAATCATTTAAATAATTTCAGAGAACGCCAAAAAGAAAACAAGAAAACATTCACCTCGTCTGTGATGTTTACAAGTTCTGTAGCATGCTTACCGCCTGTTTAAAGTCCCAGTTTTGTCCGCTGTACGGGGGAAGCATCAGCATAGGGGCTCTAAGTGCACTTGGCAGACAGTTTCTTTCAGCCTGACATCCTTAACTCAAAAAATCTCCTGCCTCAGCTTTTTTATTCCAAGGTTAGAAAGTTCACATTACTAACTGAGAGCAGATGCCAAAACATTCACCTTGCACATCTCCCTGATCAAAGCTGCGGATTGACATTTGCAATGGGCAAAATGCTGAAAGTTAAGCTAAACTTGTTTTCTCTCTCTCTCCCTCGCTGTTGTTTTGGCAGGAGTCGGAAGACGAGCGGAGAGTGGGAGTAGTGAAAGTGGTGGAGGAGTGAACCCGGAGCAGGTGAACACAGCTGCGGACCGCCATGGGCTCTCTTCCATCGGTCCCGACTCTCCGTCTTCGGGTCTCTGAGAGACGGCAGGGGCCAGCCAGGGAGCGTCGGAGTGGGCAGGCGAGGCAGCTCGCTTTCCCCGCCGGCTACCGGCTCCTCAGCAGCGAGGAGGGAGAGAAATCAATACTGAGGAGAGATGCTGCCAGGGGTCGCCCAACGCTGCCTCCAGCCATGGAGCCATGGGAGCCTGTGTGTACCGCTTTCTCTCTCTCTCAGCCCAATCTCAGTCAACTTGCATCAGCTAAAGAGAGGGCCAACAGCCTTGACGCTCTTCATGCAACACTGAGTGTGTTGCGAGATGGAGCAAGTTCCAGAAAAGTTGCTTCCGCAAGGCCGCAGGTCCTCTTCAGATATGGACGACTGAAACGTGGCCTGCACAAGATGCTAACAATTCGAAAAATGGAGTGCTGGTTGCAGTGGATAGTTCCTGTGTCCTTGGATGCTCAACAGGAACAAGTTGGATTCGTGGCAGATGACTGTATAGATTCCCGCCACCCTATCTCATCTCCACTGGGCAGCGCCTTCGACAAAATGGCCGCCGATGCCTGCCAGCTGTCTCCCTGCCAAGATGGCGGCACCTTAAACACTGCCCATCTGCATAACCAAGGGCCAGTATGCAGATTCCGGATAATTGCATTTGCATATGCTTGTTTTCCTCGCCCGTTATTGGTGGGGCCAGTAATTCACGCCGCCTTTGAACAGGCAGGGCATATGCACATGTTTCCTTTATCGCCTGAATCCTTTTACAGTCTGTCTGCTTTATGTTAAGCTGCAGTAGCGTTCTATCATTGGAAATGGGTGAAAAATATGGCGTTAACACACACAAAGCATCTGATGCCTGTGCCATCTGTGACATCTGCGACTGGGTAGTCTAGCTACATAAATCCCTCACTCGCAGGGCCCGGTTCCAGACAGCCTCCCATAATGACCTCATTAGCATGCACAGCACTCCTCACTGTAGGCCCTGGTGCACTGCTGTGCCGTGGGACCCGACAATCCGCGCCCTTCACACAAACGCTCGCCGGGCAACATTGTGTTCCTCCTCACAATACAAAACTTCACACTTGTTTTATTACAATCATGTCACTGGAGCTGAAGATCTGAAAGGGGCTTAGGCAGTTAGCCTACATGCTCAGGGAGATGTCTGTGTACAATGTCTGTTGGTTTTTTCAGCCAGGCTAATGAAGTAGTTGTTGGGTTGATTCAGATTTTATTCATTTTTATTTTTATTTAATTTAAATTGATTTAAACATATTATAAGATATGCCAGTACAAGTTGCTTTCAGTTAAAACAGCTCAAACATGCAATTTAGTCTGGGACTAGCTTAAGCCTCATCTGTGAAACCGGGGGATAGAGTTTAAAAACGAAACTATTTTGAGCTTGAAATTGCAGCATTGTAGTAGTAAACTCGCGCAAAGACTAGATGGCAAAATGGTAAGAAATTAGCCTTTACAAAAATGCACAACCCAAACCCTAAACCTTGTTAATGTAATAGGAAAAAAAAGGTATAAAAGTAGTAGCTTTTCAAATGAGACAAATTGTAATATCTTGCGATTTCGCCATGTCGTAAGAACCATTACGAGTCATAATGAAGTGTGATGACTAGTTCCTGTCACTTACCATTTTGTTTCAGTCATAAAAGCTGAGAAATTCTGAAATTAGGGTGGGATGACTAGTACCGTACAGCAGTAAATAGATGCATTTTTCGTAAAGACTGCTCTATGATATAAGAATGATAAAGTAATGCAGAATAGAATACATAAAGAGACGTATTGCAAATTTATTAGGGGGTATTGTTTGGGATAACGGGATGTTTAGTTTCTATGTTGCTCAGCAACCGTAAACAACTTGACGCATTAATACTGAATGTTCATATTTTCTTGATTGTTTCAAGCCCCTTTTTTTTCATTTTGATTAGCTTTTTTTTTTTAAGTAGCATATTGGATGCTAGTGATGCTAACGAATAACTGTGAAGTTGTCTGGAATAACCGTTTCTCTTATTGGTTGTATTGTTTGTGGTTCATAGTTGTAATATGTCTTGTGGGTGGGGTGATTTGGTTTAAATTGGGAGGAGAGGGCAGTTAAATTTTGAGGTGGGTGTGGGGTGGGGGGGCTTATGCGTCTGTCTGGACAAGTTGATGTCTAAAACGCATATTAGCAGCAGAGTGGTACGTCTGGGTCAAGCAGTCTGCGTTCGTTCCATATTTGCATATTTACAACAGCTGGGGAGCCCATATGTTTTAGCCTGAGCCAGACAAAATTATATATAGCCTGACACGCTAGCAAGGCTACCGCACCCCATGGCCCCCCTAAACAAATACACACACTCACACATGCCGTGCCATTCGAGTTCTCTTCAAAACACAAAAATACCCCCCTCCCACCTGAAGGAAAAAAAGGAAAACCAAAAAGCTTTTATGCTAATCGCAGCGTTAGCCATGCGTGTGAGTACACTAGTGCAATTATGCATAATTCAACGCAAAGCTAGGCTGGGAGGCTGAGTACAGTAAATCCTGTTAGTAGCCCGCAAAGGCGGGAAACGAAAGGAGGGGACGGTGGGGCGAGTGTTACGCCCATTAGGTGCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_02531026_02532411.mRNA False 3133 mRNA 0.45 3 2530509 2534232

Neighbor

gene id symbol gene type direction distance location
CI01000030_02472528_02477483 NA coding upstream 53026 2472528 ~ 2477483 (+)
CI01000030_02466855_02469633 NA coding upstream 59936 2466585 ~ 2470573 (+)
CI01000030_02452403_02456555 NR2C2AP coding upstream 73638 2452403 ~ 2456871 (+)
CI01000030_02423347_02426071 NA coding upstream 104208 2422768 ~ 2426301 (+)
CI01000030_02289500_02291562 HAPLN4, HPLN4 coding upstream 238081 2289500 ~ 2292428 (+)
CI01000030_02573116_02582804 GATAD2A coding downstream 38884 2573116 ~ 2582812 (+)
CI01000030_02620111_02632697 YJEFN3 coding downstream 85879 2620111 ~ 2632722 (+)
CI01000030_02641511_02650047 CILP2 coding downstream 106813 2641045 ~ 2650539 (+)
CI01000030_02678940_02684491 NA coding downstream 144708 2678940 ~ 2684591 (+)
CI01000030_02705058_02731134 NA coding downstream 167579 2701811 ~ 2731151 (+)
G158555 NA non-coding upstream 83057 2447009 ~ 2447452 (+)
G158548 NA non-coding upstream 103734 2426494 ~ 2426775 (+)
G158508 NA non-coding upstream 218039 2304497 ~ 2312470 (+)
G158490 NA non-coding upstream 268666 2261553 ~ 2261843 (+)
G158436 NA non-coding downstream 118412 2652644 ~ 2653106 (+)
G158434 NA non-coding downstream 121043 2655275 ~ 2655548 (+)
G158566 NA non-coding downstream 122741 2656973 ~ 2657187 (+)
G158567 NA non-coding downstream 124030 2658262 ~ 2658521 (+)
G158398 NA non-coding downstream 153311 2687543 ~ 2690341 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 248139 2277208 ~ 2282743 (+)
G157726 NA other upstream 892282 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 1523822 1003114 ~ 1003795 (+)
G157227 NA other upstream 2174026 327649 ~ 356483 (+)
G157108 NA other upstream 2383656 116156 ~ 146853 (+)
G158416 NA other downstream 61644 2595876 ~ 2614293 (+)
CI01000030_03018776_03042194 FGF22 other downstream 479224 3018776 ~ 3043773 (+)
G159685 NA other downstream 1897568 4431800 ~ 4488526 (+)
G159816 NA other downstream 1982546 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4665703 7200104 ~ 7202485 (+)

Expression


Co-expression Network