Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000030_03058744_03059657 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000030 |
| NCBI id | null |
| chromosome length | 11638347 |
| location | 3055871 ~ 3059667 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Si:dkey-78l4.5 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000030_03058744_03059657.mRNA | True | 3378 | mRNA | 0.40 | 3 | 3055871 | 3059667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000030_03018776_03042194 | FGF22 | coding | upstream | 13677 | 3018776 ~ 3043773 (+) |
| CI01000030_02919390_02954905 | HCN2B, HCN2 | coding | upstream | 100446 | 2919390 ~ 2955425 (+) |
| CI01000030_02911153_02916952 | NA | coding | upstream | 138919 | 2909400 ~ 2916952 (+) |
| CI01000030_02891265_02897170 | FSTL3 | coding | upstream | 157429 | 2891111 ~ 2898442 (+) |
| CI01000030_02843446_02856037 | CBARPB | coding | upstream | 199655 | 2843446 ~ 2856216 (+) |
| CI01000030_03060378_03062683 | NA | coding | downstream | 660 | 3060327 ~ 3063096 (+) |
| CI01000030_03066708_03068158 | NA | coding | downstream | 6990 | 3066657 ~ 3068230 (+) |
| CI01000030_03070497_03070798 | NA | coding | downstream | 10788 | 3070455 ~ 3071137 (+) |
| CI01000030_03086334_03087738 | NA | coding | downstream | 26667 | 3086334 ~ 3087800 (+) |
| CI01000030_03106589_03108355 | NA | coding | downstream | 46871 | 3106538 ~ 3108519 (+) |
| G158681 | NA | non-coding | upstream | 85641 | 2968657 ~ 2970230 (+) |
| G158676 | NA | non-coding | upstream | 147355 | 2908295 ~ 2908516 (+) |
| G158664 | NA | non-coding | upstream | 173715 | 2881841 ~ 2882156 (+) |
| G158660 | NA | non-coding | upstream | 178876 | 2876743 ~ 2876995 (+) |
| G158585 | NA | non-coding | upstream | 348710 | 2706948 ~ 2707161 (+) |
| CI01000030_03139836_03149991 | NA | non-coding | downstream | 90131 | 3139836 ~ 3150010 (+) |
| G158767 | NA | non-coding | downstream | 103576 | 3163243 ~ 3163472 (+) |
| CI01000030_03172301_03180142 | NA | non-coding | downstream | 112827 | 3172255 ~ 3180536 (+) |
| G158774 | NA | non-coding | downstream | 147331 | 3206998 ~ 3207286 (+) |
| G158766 | NA | non-coding | downstream | 152116 | 3211783 ~ 3212301 (+) |
| G158416 | NA | other | upstream | 441578 | 2595876 ~ 2614293 (+) |
| CI01000030_02277208_02282376 | TM6SF2 | other | upstream | 773501 | 2277208 ~ 2282743 (+) |
| G157726 | NA | other | upstream | 1417644 | 1636867 ~ 1638227 (+) |
| CI01000030_01003310_01003776 | NA | other | upstream | 2049184 | 1003114 ~ 1003795 (+) |
| G159685 | NA | other | downstream | 1372133 | 4431800 ~ 4488526 (+) |
| G159816 | NA | other | downstream | 1457111 | 4516778 ~ 4517381 (+) |
| CI01000030_07200104_07202258 | GCGA | other | downstream | 4140268 | 7200104 ~ 7202485 (+) |
| CI01000030_07868597_07886123 | NA | other | downstream | 4794418 | 7868292 ~ 7886228 (+) |
| G162088 | NA | other | downstream | 5178298 | 8237965 ~ 8239604 (+) |
