CI01000030_03106589_03108355


Basic Information

Item Value
gene id CI01000030_03106589_03108355
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3106538 ~ 3108519 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03106589_03108355.mRNA
ATATTTATACCGTGTTTAGCCAGCAAGAGCTCGTCGATCGTCTTCTTCATCATGACCATCATCATCTCTCTGCTCCTGCTGGCCTCTCTGCTGCCACACCTGACCTTCACTGCTCGTATGAATGTGGGTATAGTGAACGGCAGAGAAGCAAAACTTCACTCCAGGCCTTACATGGTTTCTGTCCAAGAGAAGAAGCAACATATCTGCGGTGGATTCCTCATTTCTGATAGATTTGTCATGACTGCTGCACACTGCAGAAACAATTCTCCAGTCCTGACAGTTGTGCTAGGTGCACATGACCTACAACAAATGAATTTGGACCGAATCAAAGTGGATTTCTATCATGAGCATCCGAACTATAACAAGAAAACCTTTCATAATGACATTATGCTTTTGAGGCTAGAAAAACATGTGGAACTAAACGACAATATCAAGTGGATATCCATACCAATGAAAGAAGATAATATCGAAGCATATACTGTTTGTAGTGTCGCAGGATGGGGAAGTTTAAAAACAAATGGGACAGGAAACAACCGTCTCATGGAGACAGATGTGACAGTCTTGAATAACAAGGAATGTGAAAGGGGATTCAGGAGGTCCTTTGGTTTGTGGAGACACTGCAGTCGGTGTAACATCCTTCGGGGACCCTCATCACTGTAATTCACTAAAACTACCTGAAGTTTATATAAAGATTTCAGCATATCTTCCATGGATAAAGAGCATTATTGGAAATTTTAATTGAATTAATTGCAGATGAAATGGGGTGATTTTTGTTTTTTGAAAGCTGAGTTGATTTCCCCCCAAATCTTCCTTTACTAAACATA

Function

NR:

description
Si:dkey-78l4.5 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03106589_03108355.mRNA True 824 mRNA 0.41 5 3106538 3108519

Neighbor

gene id symbol gene type direction distance location
CI01000030_03086334_03087738 NA coding upstream 18738 3086334 ~ 3087800 (+)
CI01000030_03070497_03070798 NA coding upstream 35401 3070455 ~ 3071137 (+)
CI01000030_03066708_03068158 NA coding upstream 38308 3066657 ~ 3068230 (+)
CI01000030_03060378_03062683 NA coding upstream 43442 3060327 ~ 3063096 (+)
CI01000030_03058744_03059657 NA coding upstream 46871 3055871 ~ 3059667 (+)
CI01000030_03110702_03118217 NA coding downstream 1636 3110155 ~ 3118410 (+)
CI01000030_03129738_03130913 NA coding downstream 21111 3129630 ~ 3131568 (+)
CI01000030_03132339_03134173 NA coding downstream 23773 3132292 ~ 3134317 (+)
CI01000030_03139836_03149991 NA coding downstream 31317 3139836 ~ 3150010 (+)
CI01000030_03157804_03158397 NA coding downstream 49114 3157633 ~ 3159327 (+)
G158681 NA non-coding upstream 136308 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 198022 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 224382 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 229543 2876743 ~ 2876995 (+)
G158585 NA non-coding upstream 399377 2706948 ~ 2707161 (+)
G158767 NA non-coding downstream 54724 3163243 ~ 3163472 (+)
CI01000030_03172301_03180142 NA non-coding downstream 63975 3172255 ~ 3180536 (+)
G158774 NA non-coding downstream 98479 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 103264 3211783 ~ 3212301 (+)
CI01000030_03018776_03042194 FGF22 other upstream 62765 3018776 ~ 3043773 (+)
G158416 NA other upstream 492245 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 824168 2277208 ~ 2282743 (+)
G157726 NA other upstream 1468311 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2099851 1003114 ~ 1003795 (+)
G159685 NA other downstream 1323281 4431800 ~ 4488526 (+)
G159816 NA other downstream 1408259 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4091416 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4745566 7868292 ~ 7886228 (+)
G162088 NA other downstream 5129446 8237965 ~ 8239604 (+)

Expression


Co-expression Network