CI01000030_03110702_03118217


Basic Information

Item Value
gene id CI01000030_03110702_03118217
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3110155 ~ 3118410 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03110702_03118217.mRNA
ATTTAAAATGCCTTTGATCACAAGTGAGAGTATTTCATGTGCAAATTCAACTGTTTTCGCTATTGACAGACAGTTGAGTAGCTTATGACCTCAGTTGCGCCACACAACTGTGACTGTTCAACCACATCCACCCTGGCCACGGTGAAAATTTTCACTGCAAACTTTTTTTCTTTTGATGTTATTAAAATGAGTAAAAGATGTATTTTATTATTTAAATGTATCATTTTAGTTGCATGCACTATAATACACAATTCTCAATTTTCCATCTACATTTTCTGTAAGATTTTTAGCACCAGAGAAGCAGTAAATAAATATATTAAAGTCTTTTTTTTCTTTTCAATGTATGATTATATTTCTAGTGAAAATGAGTCAGTGAGTCAGTCATTAATTAATCACTTGGTCTTGTTTACAGCTCATTTGAATTTGTTCTAGATATGACATTGTGGTGTCCTGGAAGCTGGTCTGATAAATAGTTACCAGAAGCTCAGTGTCTCCACCCACCCTTATATTTATACAGTGCTTTGAGAGCTCACAGATTGTCTTTATCATGACCATCATCATCTCTCTGCTCCTGCTGGCCTCTCTGCTGCCACACCTGACCTTCACTGCTCGTGTGAATGTGGGTATAGTGAACGGCACAGAAGCTAAACCTCACTCCAGACCTTATATGGTTTCTCTTCAGAAGAACTGGCTGCATGTCTGCGGTGGATTCCTCATTTCTGATGAGTTTGTCTTGACTGCCGCACATTGTCGAAAGAGACCAGAGACTTTGACAGTTGTGATTGGTGCACATGAGCTAAAAAATAAGACTGAGGGTTCAGTGCGCATCGGAGTGATGTCCTACCACCAGCATCCAGACTTTACTGTGGAACCTGTTATGAATGACATTATGCTTTTAAGGCTGGATAAAAAAGTCACACAAAACGAGAAAGTCAACTGGATATCCATACCAATGAAAGAAGGGGACATTGAAGTGCATTCTGTGTGCAGTGTTGCAGGCTGGGGAAGACTGAATATTAATGGCTCCCTTAGCAATCATCTCATGGAGACATATGTGAAGATCATGAATAACACAAAATGTGAAAATAAATGGAGAAAATACAACTATTCAGCTTCACAGATGATGTGTACATATGGTGATGGAGGAAGTTGCACCATGAATTTGGTATCATCTAGGGTTACAAAAATGGCATGTTTATATTTAGATTACAGTATAAAACTTGAATTTGTCTCTACCGCAACACAAAGTCTTTACCGCAACACCTAAAAATGCTGCGGTAAAGACATGTTGCGGAAATGACATTTTTGCTAATATTGCTGATAACTGGCAGCTAGCATGGTCTGATACATCAGTTTTGACTTTTAGCACCACATAAACATGTATTCAACAGTAATATAAATTCATTTTTAAAATGTAGTTCAAAATACACAATTACTAAGCTGAATGGTATTGATGCACA

Function

NR:

description
Si:dkey-78l4.5 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03110702_03118217.mRNA True 1460 mRNA 0.38 5 3110155 3118410

Neighbor

gene id symbol gene type direction distance location
CI01000030_03106589_03108355 NA coding upstream 1636 3106538 ~ 3108519 (+)
CI01000030_03086334_03087738 NA coding upstream 22355 3086334 ~ 3087800 (+)
CI01000030_03070497_03070798 NA coding upstream 39018 3070455 ~ 3071137 (+)
CI01000030_03066708_03068158 NA coding upstream 41925 3066657 ~ 3068230 (+)
CI01000030_03060378_03062683 NA coding upstream 47059 3060327 ~ 3063096 (+)
CI01000030_03129738_03130913 NA coding downstream 11220 3129630 ~ 3131568 (+)
CI01000030_03132339_03134173 NA coding downstream 13882 3132292 ~ 3134317 (+)
CI01000030_03139836_03149991 NA coding downstream 21426 3139836 ~ 3150010 (+)
CI01000030_03157804_03158397 NA coding downstream 39223 3157633 ~ 3159327 (+)
CI01000030_03172301_03180142 NA coding downstream 53845 3172255 ~ 3180536 (+)
G158681 NA non-coding upstream 139925 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 201639 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 227999 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 233160 2876743 ~ 2876995 (+)
G158585 NA non-coding upstream 402994 2706948 ~ 2707161 (+)
G158767 NA non-coding downstream 44833 3163243 ~ 3163472 (+)
G158774 NA non-coding downstream 88588 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 93373 3211783 ~ 3212301 (+)
CI01000030_03018776_03042194 FGF22 other upstream 66382 3018776 ~ 3043773 (+)
G158416 NA other upstream 495862 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 827785 2277208 ~ 2282743 (+)
G157726 NA other upstream 1471928 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2103468 1003114 ~ 1003795 (+)
G159685 NA other downstream 1313390 4431800 ~ 4488526 (+)
G159816 NA other downstream 1398368 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4081525 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4735675 7868292 ~ 7886228 (+)
G162088 NA other downstream 5119555 8237965 ~ 8239604 (+)

Expression


Co-expression Network