CI01000030_03129738_03130913


Basic Information

Item Value
gene id CI01000030_03129738_03130913
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3129630 ~ 3131568 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03129738_03130913.mRNA
TTTTAAAAAAGGAGGTGGAGTAACATGCCGCTTAATGTCTCCGCCCATATTTAAAGTATATTTATATCGTTTTTAGCCAGTGAGATCTCAGTGATTGTCATCTTCATCATGACCATCATCATCTCTTTGCTCCTGCTGGCCTCTCTGCTGCCACACCAGACCTTCACTGATATAGTAAACGGCAGGGAAGCCAAACCCCACTCCAGACCTTACATGGTTTCTCTTCAATATACCGGGCAACATATCTGTGGTGGATTCCTCATTTCTGATCAGTTTGTCTTGACTGCTGCACATTGCAGGGTCACAAAAGAGATTTTGACAGTTGTGGTTGGTGCTCATGACTTAAGTAAAAGCGAGAGTTCAGATCGCATCGGAGTGAAGTCCTACATCCCACACCCAAACTATAAACTCAAGCCTATTCAGAATGACATCATGCTTTTGAAGCTAAAGAAAAAAGTCAAACTAAACAACAACGTTAGACTGATATCATTACCAAGGGATGGAGAAGATGTGGGAACAGATACGGTCTGTATTGTTGCCGGCTGGGGAAGCCAGGTGCTTAATGGCACGGGAAGCAAAGTTCTAATGGAGGCAAGCATGACTACAATAAATCAGGCAGAATGTCAGCGTAGATGGCGATTGAGCTTCTTGACCTCACAGATGATCTGTGCATATGGCGGTGGTGGATCCTGCTCAGTATGTACAAAAGATGATTCACAGATGTTATGATAATGTACAAACTGGTTTCACTAGTGATGTGTTGATCTATCTTTCTCAACAAGGGGGATTCAGGAGGTCCTTTGGTTTGTGGAGACACTGCTGTTGGGGTCACGTCTTTTGTATATTCAAGGCTCTGCAATTCACCCAAGCGTCCTAATGTGTATACTAAGATTTCAGCATTTATTCAATGGATCCGCAAAGAAATTGGAAATATTAAGTGACTTCATGTAAACTAAAAAAGGAAGAAATGTTTTTCTTGAATTCTTCCATAAACCTCCTTCCAGAAGTTTTGGATTTTTGAACACTCCCAAAGACAGTGATATAGTGTACCTTTCTCGTCCGAACATTTAGAGCACACATCAGGAACATTAGCGGACATGTGAAGTTTGACAGGAGCTATCTGTGTTCTCATTAATCATTTATATTGAAGTAATGTAAACTTTGTGTTTGTTGTCTGTGTTTGTGCTTTTAGACAAGCATCATTCCAATCTGTCCCATCTATGTCTTCATACCCCTCATTCATGTTTTCTTTTTTACAAGGATTTAATTTATCTAATGTTGATTCAGAACTATATTTAACCATTAAGTTATATTATATAGATACACGCCCCTTCCCTTCTAAATTTCCAGGTGTTATTTCCTCTAATTTTGATAAAGGTATCTA

Function

NR:

description
Si:dkey-78l4.5 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03129738_03130913.mRNA True 1384 mRNA 0.40 4 3129630 3131568

Neighbor

gene id symbol gene type direction distance location
CI01000030_03110702_03118217 NA coding upstream 11220 3110155 ~ 3118410 (+)
CI01000030_03106589_03108355 NA coding upstream 21111 3106538 ~ 3108519 (+)
CI01000030_03086334_03087738 NA coding upstream 41830 3086334 ~ 3087800 (+)
CI01000030_03070497_03070798 NA coding upstream 58493 3070455 ~ 3071137 (+)
CI01000030_03066708_03068158 NA coding upstream 61400 3066657 ~ 3068230 (+)
CI01000030_03132339_03134173 NA coding downstream 724 3132292 ~ 3134317 (+)
CI01000030_03139836_03149991 NA coding downstream 8268 3139836 ~ 3150010 (+)
CI01000030_03157804_03158397 NA coding downstream 26065 3157633 ~ 3159327 (+)
CI01000030_03172301_03180142 NA coding downstream 40687 3172255 ~ 3180536 (+)
CI01000030_03185116_03188245 NA coding downstream 53503 3185071 ~ 3188312 (+)
G158681 NA non-coding upstream 159400 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 221114 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 247474 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 252635 2876743 ~ 2876995 (+)
G158585 NA non-coding upstream 422469 2706948 ~ 2707161 (+)
G158767 NA non-coding downstream 31675 3163243 ~ 3163472 (+)
G158774 NA non-coding downstream 75430 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 80215 3211783 ~ 3212301 (+)
CI01000030_03018776_03042194 FGF22 other upstream 85857 3018776 ~ 3043773 (+)
G158416 NA other upstream 515337 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 847260 2277208 ~ 2282743 (+)
G157726 NA other upstream 1491403 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2122943 1003114 ~ 1003795 (+)
G159685 NA other downstream 1300232 4431800 ~ 4488526 (+)
G159816 NA other downstream 1385210 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4068367 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4722517 7868292 ~ 7886228 (+)
G162088 NA other downstream 5106397 8237965 ~ 8239604 (+)

Expression


Co-expression Network