CI01000030_03132339_03134173


Basic Information

Item Value
gene id CI01000030_03132339_03134173
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3132292 ~ 3134317 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03132339_03134173.mRNA
TTATTTATACAGTGTTTTGTCATGAGAGCTCACAGATTGTCTTTATCATGACCATCATCATCTCTCTGCTCCTGCTGGCCTCTCTGCTGCCACACCTGACCTTCACTGATCATGTGAATGTGGGTATAGTGAATGGAACAGAAGCCAAACCTCACTCCAGACCTTACATGGTTTCTCTTCAAAAGGAAAAGAATCATATCTGTGGTGGATTCCTCATTTCTGATCAGTTTGTCTTGACTGCTGCACATTGTCGAAAGAAAAATGAAATACTAACAGTTGTGGTTGGTGCACACAACCTAAAAAATGAGAATGAAGGTTCAGTCCGCATCGGAGTCAAGTCTTACCACAAGTATCCGGGCGCTATGAATGACATTATGCTTTTGCAGGGGGATTCAGGAGGTCCTTTGGTTTGTGATAACACAGCTGTTGGTGTCACATCCTTCGGTGACCCTCGTCGCTGTAATTCACCTAAGTATCCTAATGTGTACATTAAGATTTCACCATATTTTCCATGGATCTATGCAAAAATTAGAAATGTTAAGTGACTTCTGAAAAGTTTTTCCTGAATTCTTACAAAATCTTTTCTTTTTTTTTTTTTCTTTTTTTTTCAATTAAAGTACATGGCAATCATCAATCAGTCAAAGTGTCTTCTTTATATAGGTGGCATATATAGGTATATGCACTGGGCA

Function

NR:

description
Si:dkey-78l4.5 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03132339_03134173.mRNA True 689 mRNA 0.39 4 3132292 3134317

Neighbor

gene id symbol gene type direction distance location
CI01000030_03129738_03130913 NA coding upstream 724 3129630 ~ 3131568 (+)
CI01000030_03110702_03118217 NA coding upstream 13882 3110155 ~ 3118410 (+)
CI01000030_03106589_03108355 NA coding upstream 23773 3106538 ~ 3108519 (+)
CI01000030_03086334_03087738 NA coding upstream 44492 3086334 ~ 3087800 (+)
CI01000030_03070497_03070798 NA coding upstream 61155 3070455 ~ 3071137 (+)
CI01000030_03139836_03149991 NA coding downstream 5519 3139836 ~ 3150010 (+)
CI01000030_03157804_03158397 NA coding downstream 23316 3157633 ~ 3159327 (+)
CI01000030_03172301_03180142 NA coding downstream 37938 3172255 ~ 3180536 (+)
CI01000030_03185116_03188245 NA coding downstream 50754 3185071 ~ 3188312 (+)
CI01000030_03196185_03200757 NA coding downstream 61231 3195548 ~ 3200805 (+)
G158681 NA non-coding upstream 162062 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 223776 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 250136 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 255297 2876743 ~ 2876995 (+)
G158585 NA non-coding upstream 425131 2706948 ~ 2707161 (+)
G158767 NA non-coding downstream 28926 3163243 ~ 3163472 (+)
G158774 NA non-coding downstream 72681 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 77466 3211783 ~ 3212301 (+)
CI01000030_03018776_03042194 FGF22 other upstream 88519 3018776 ~ 3043773 (+)
G158416 NA other upstream 517999 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 849922 2277208 ~ 2282743 (+)
G157726 NA other upstream 1494065 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2125605 1003114 ~ 1003795 (+)
G159685 NA other downstream 1297483 4431800 ~ 4488526 (+)
G159816 NA other downstream 1382461 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4065618 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4719768 7868292 ~ 7886228 (+)
G162088 NA other downstream 5103648 8237965 ~ 8239604 (+)

Expression


Co-expression Network