CI01000030_03157804_03158397


Basic Information

Item Value
gene id CI01000030_03157804_03158397
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3157633 ~ 3159327 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03157804_03158397.mRNA
ATTTAAATCAGCCTCAACATTCTATGTCAGTCCAGCAGCTTGAGTTTATATTTGAAATCATCACAACTGTCCCTGAAGCCTTGAAGCCTGATCATACACGCTACAAACTCTTCACAACTCTACTATTTGACAAGTTTCATCAGTTCGGGAAGTGTTTCTTCAGTCATCAGCATGGAGCAGCGTCGCCTGAGAAGAACCAGGGCTCTTCCCACACACCTGAGGGGATTCTGGGTCTCTTCTGTTCGAGAGCGCTGTGAGCTTACATGGCTGGCAGCTGTAAGCAGGTTGGATCACACTTACAGCTGCATCTCTGCCAAAGCTCAAAGATCCAAAGGATTGGAAGAGCAAGTGCCCAAGTGCTACTTGAAGAACGCAGCTGTCCTTCCCGACGTCCGTCCAGCAGCCTCAGTCTCTTCGGTGGACGTGTGTCCAGCTCCTCTTTGTCAGCAGGAAGAGTCTGTCTCCATCCATGGCTACAGTATGCAGGGCTACCAGGACATTTACCGCTCTGTGGCAGAGCCCATGATAAAGACACGCTTTGGTCGGCACCGTCCATACAGCCTTGAGCTGGGACTGAAGATTAAGCAGCGCCTGTGGGAGACTCTCAAGCGCCCTTCACTGCTGGAGACAGAGCAGCCTGATGGACGTGTCCTCATCACTGAGAGCTTCTCCACATCCAGCAGAAGCTTCGCTCCTCGTGTCCATGTGGATATCAGTGAAGAGCCGCTGCCAGAGGAACCACCAAGAAAGAAGCCCAGACACTGAGTCATCACAGCGGGGCTACGTATGTACAAACTGTATATAGTTATAGAGTACGTTTATAGTTTTATGAGTAAGTTTCAGTTAAGTTTTAGTTTGAGTACTTTTTTTATTTTGTTAAGTACATTTTTAGCACATTGCTTTGTGGTTGCAAGGATGTTTTGGTGGCTGTCAATGCACTGTCATGCGGTTTCTCGGTTGTTTTAAACAGATTTTAGTCTTTTGCTACATGGTTGTCGGGATGTTTCGGGTGGTTCTGGTGTTGACATGCGTTTGCCAAGGTTTTCTGAGCGGTTGTTATTGTGTTGCTGTGCGGTTGTTGGACTCTTCCGAGTGGTTTTTGAGCATTGCTACATGGTTGTTAGGATGCTTTGTGTGGTTGGTTGATATGCGGTTGCGTTCAAAGAGTTAAGTTAGGATAGGTTAGGGTCCCTCACACGGTTTGCAGCTTGAAGTGCTGTGAGGGCTTGTGTGCATCAGTGATGCTGAGAGCTACGCCACTGCTACTTCACAACTACTGTTAGGGTCACCCATAGTGGACAGGTCTCAGCTGAGATGCCAGACGAAGACAAACCACCTGATTCTGGACTGCAGAAGATTGGCCTGATGTTCCTGGCAGAAGATCACAGTCTTGTGACAACAGCAACAACGTCAGAATTACTGAATGCAAGAAACTTCACACTGATTATATATGTGGAAGTCGCAGATGGATCGATGGAAGCAACTGTTCGAACAGAACGAGGAAACAAACTGCTTTAATATTGGTAAAGGTGTACGACAAGTCTGCGTTCTTTCTTCAGCGCTCAGCCAATCAAATTTGAGGACCGGTAATTACATCATGTGCATTATAAAATAAAATAAAATAAAAAAATAAAACCGGTAATTACACCATGCATTATAATATAATATAATTACTTAAATGCTTGTATGCATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03157804_03158397.mRNA True 1695 mRNA 0.46 1 3157633 3159327

Neighbor

gene id symbol gene type direction distance location
CI01000030_03139836_03149991 NA coding upstream 7642 3139836 ~ 3150010 (+)
CI01000030_03132339_03134173 NA coding upstream 23316 3132292 ~ 3134317 (+)
CI01000030_03129738_03130913 NA coding upstream 26065 3129630 ~ 3131568 (+)
CI01000030_03110702_03118217 NA coding upstream 39223 3110155 ~ 3118410 (+)
CI01000030_03106589_03108355 NA coding upstream 49114 3106538 ~ 3108519 (+)
CI01000030_03172301_03180142 NA coding downstream 12928 3172255 ~ 3180536 (+)
CI01000030_03185116_03188245 NA coding downstream 25744 3185071 ~ 3188312 (+)
CI01000030_03196185_03200757 NA coding downstream 36221 3195548 ~ 3200805 (+)
CI01000030_03202618_03204279 NA coding downstream 43246 3202573 ~ 3205060 (+)
CI01000030_03218927_03220573 HSD11B1LA coding downstream 59600 3218927 ~ 3221005 (+)
G158681 NA non-coding upstream 187403 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 249117 2908295 ~ 2908516 (+)
G158664 NA non-coding upstream 275477 2881841 ~ 2882156 (+)
G158660 NA non-coding upstream 280638 2876743 ~ 2876995 (+)
G158767 NA non-coding downstream 3916 3163243 ~ 3163472 (+)
G158774 NA non-coding downstream 47671 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 52456 3211783 ~ 3212301 (+)
G159234 NA non-coding downstream 82169 3241496 ~ 3241775 (+)
CI01000030_03018776_03042194 FGF22 other upstream 113860 3018776 ~ 3043773 (+)
G158416 NA other upstream 543340 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 875263 2277208 ~ 2282743 (+)
G157726 NA other upstream 1519406 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2150946 1003114 ~ 1003795 (+)
G159685 NA other downstream 1272473 4431800 ~ 4488526 (+)
G159816 NA other downstream 1357451 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4040608 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4694758 7868292 ~ 7886228 (+)
G162088 NA other downstream 5078638 8237965 ~ 8239604 (+)

Expression


Co-expression Network