CI01000030_03185116_03188245


Basic Information

Item Value
gene id CI01000030_03185116_03188245
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3185071 ~ 3188312 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03185116_03188245.mRNA
ATATTTATACTGTGTTTAGCCTGTGAGAGCATCAGTAAGATCGTCATGACCATCATCATCTCTCTGCTCCTGCTGGCCTCTCTGCTGCCACACCTGACCTTCACTGATCATGTGAATGTGGATATAGTGAACGGCGAGAAAGCCAAACCTCACTCCAGACCTTACATGGTTTCTCTTCAGAAGGAAAAGAATCATACCTGCGGTGGATTCCTCATTTCTGATCAGTTTGTCTTGACTGCCGCACATTGCCGAAAGAAAAATGAAATACTAACAGCTGTGATTGGTGCACATGACCTAAAAAATGAGAATGAAGGTTCAGTCCGCATTGGAGTGAAGTCTTACTTCAAACATCCAGACTTTTCCCTTCATTTGGAACGGAATGACATTATGCTTTTGAAGCTAGAGAAAAAAGTCAAACCAAGCAAACATATAAATTGGATATCATTACCAAAGAAAGAATCCATCAAAAAAACAGACCCTGATTGTAGTGTTGCAGGCTGGGGATGTCTGCACATTACTGGTCCAAACACTGATTATCTTATGGAGGCCAATGTGAAGATAATGGATAATGCAACATGTAAAAAAAAATGGGGAAAAACCTACTCGGTCTCACAGATGATTTGTGCACATGGCCACGGTGGATCCTGCAAAGGGGATTCAGGAGGTCCTTTGGTTTGTGGAAACACTGCTGTTGGTGTCACATCCTTCGGTGACCCTCGTCGCTGTAATTCACCTAAGTATCCTAATGTGTATACTAAGATTTCAAAATATATTAAATGGATCCATAAAAAAATGAGAAATGTTAAGTGACTTCATGGTGGTGAAAAGGAAGAAAAGTTTTTCCTGAATTCTTCCAAAAACTTTTTTTTTTTCTCCA

Function

NR:

description
Si:dkey-78l4.5 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03185116_03188245.mRNA True 877 mRNA 0.40 5 3185071 3188312

Neighbor

gene id symbol gene type direction distance location
CI01000030_03172301_03180142 NA coding upstream 4535 3172255 ~ 3180536 (+)
CI01000030_03157804_03158397 NA coding upstream 25744 3157633 ~ 3159327 (+)
CI01000030_03139836_03149991 NA coding upstream 35080 3139836 ~ 3150010 (+)
CI01000030_03132339_03134173 NA coding upstream 50754 3132292 ~ 3134317 (+)
CI01000030_03129738_03130913 NA coding upstream 53503 3129630 ~ 3131568 (+)
CI01000030_03196185_03200757 NA coding downstream 7236 3195548 ~ 3200805 (+)
CI01000030_03202618_03204279 NA coding downstream 14261 3202573 ~ 3205060 (+)
CI01000030_03218927_03220573 HSD11B1LA coding downstream 30615 3218927 ~ 3221005 (+)
CI01000030_03229393_03232355 NA coding downstream 40969 3229281 ~ 3232454 (+)
CI01000030_03238201_03242662 NA coding downstream 49680 3237992 ~ 3242902 (+)
G158767 NA non-coding upstream 21599 3163243 ~ 3163472 (+)
G158681 NA non-coding upstream 214841 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 276555 2908295 ~ 2908516 (+)
G158774 NA non-coding downstream 18686 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 23471 3211783 ~ 3212301 (+)
G159234 NA non-coding downstream 53184 3241496 ~ 3241775 (+)
G159261 NA non-coding downstream 128649 3316961 ~ 3317302 (+)
CI01000030_03018776_03042194 FGF22 other upstream 141298 3018776 ~ 3043773 (+)
G158416 NA other upstream 570778 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 902701 2277208 ~ 2282743 (+)
G157726 NA other upstream 1546844 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2178384 1003114 ~ 1003795 (+)
G159685 NA other downstream 1243488 4431800 ~ 4488526 (+)
G159816 NA other downstream 1328466 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 4011623 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4665773 7868292 ~ 7886228 (+)
G162088 NA other downstream 5049653 8237965 ~ 8239604 (+)

Expression


Co-expression Network