CI01000030_03202618_03204279


Basic Information

Item Value
gene id CI01000030_03202618_03204279
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3202573 ~ 3205060 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03202618_03204279.mRNA
GTATATAAATGACTGTGGTGGTCTCTCCAGCAGTGTCTTGTCAAGATGAATGCAGCATACAGCCTGTTGCTCTCAGTGGCTTTGACAAGCTTGACACTGACAGGTACATTTGGAGCTGATATCACCAATGGCAAAAAAGTCAAGAAGAACTCCATGCTTTACATGGCATCAGTTCAGATTGATGGAAAACACAGATGTGGAGGATTCCTGATCGACCCGAGCTACGTGATGACAGCCGCACAATGCGATGAAAGAGGCAACATGACTGTGATCTTGGGCACCCACAACATCAGTCCACAGAAGGCGAATCTGAGAAGATACATAGTGCAACATAAACATAAGCACCAATCTTTCAGAGACCCAAAAAATGGCTATGACATCATGCTTCTCAAGCTGTCCAAGAAAGGTGTGAAAGGTGTGAAAACCATCAAAATCCCAAACAAAATCCCCAGCAAACCACTGAAGCCTAATTCCAAGTGCCAGGTTGGGGGATGGGGTAAAACTGAACAGCATAATGTGGTGAACGATCTGCTGGTGACAGATGTGTCGACTATCAACTTCACAACCTGCCAGACGATGTGGAAAAAACTGCGAGTGAAACCCCCCGACAACGTCCTGTGCACTGTGGGCTCCAAGACTAAAAGTGGCGCTTGTCAGGGCGATTTAGGTGGACCGCTAGTGTGCAATGGGAAAGCGGTGGGCATCGCCTCTTTGGAACGCTGTGACTCCCCAGATGTTCCCAACATTTACACTCAAATTTCAAAATACACATTATGGATCAAGAAGGTGATCAATGGAGGTGCTTGATGCCTTTGAAACTGAATTGTATTGTTGTGCATGGTGGTGTGAGAGGTCATTCAGTCTCATTTTGCTGTTTCTTAGATCGTCACAAAAATGCTGTTGGTGCATGAGGCAGGTTGAAAAAAAGAGAGAAAAGAATTTGCTTAAGAAAGTGCATTTGCTGTCACATTAGTTAGCCTAAAGTAAAGTTCTCATCATTCTTTGTATTTCCTTGGGTTTAAAACAGACCATGTAGGCCATGATGCACAAAAACCACAAACCATATTTTTTTTTTTTCCATGTTCTATTAATCTAACATGTTCTGGTAATACAACATGTTCCATTAATCTAACATGTTCTGGTAATACAACGTTTGCGGCCACAGAATAACTTTCAAAATGAGTCAAGACCTGCAAAAAGGAGCTGGGGTCCATCTTGACACAAATGCAGCATCACTCTGTGGTAAAGCTGAAAAGTGTTGCTAAGTAATACTTTTATGTGGTTAACAGACTGTTTCAAAGATTAACTTCCATAGTCTTGTAAACAGTGTTTAAAAAAATGACCTGTTTAGCAAACATATTCACACAGAAGAACTACATCCATCAAAATATTTGACATGATTTATTTTACACAAGTCAGAGCAACATGTGATTATAAACTATAAAACTCAGTTGCAGTCAAATTTGTGTCTATATAAAAGGTGAATTTCGAATTCCAGAATGCCAGAACAGACTATTTCCTGTATATATAGAACTGTATTCTGTATGCTATATTCTGCAATTATGATTACACATACAATACTAACCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03202618_03204279.mRNA True 1588 mRNA 0.40 5 3202573 3205060

Neighbor

gene id symbol gene type direction distance location
CI01000030_03196185_03200757 NA coding upstream 1768 3195548 ~ 3200805 (+)
CI01000030_03185116_03188245 NA coding upstream 14261 3185071 ~ 3188312 (+)
CI01000030_03172301_03180142 NA coding upstream 22037 3172255 ~ 3180536 (+)
CI01000030_03157804_03158397 NA coding upstream 43246 3157633 ~ 3159327 (+)
CI01000030_03139836_03149991 NA coding upstream 52582 3139836 ~ 3150010 (+)
CI01000030_03218927_03220573 HSD11B1LA coding downstream 13867 3218927 ~ 3221005 (+)
CI01000030_03229393_03232355 NA coding downstream 24221 3229281 ~ 3232454 (+)
CI01000030_03238201_03242662 NA coding downstream 32932 3237992 ~ 3242902 (+)
CI01000030_03253246_03261669 RGMD coding downstream 48186 3253246 ~ 3261943 (+)
CI01000030_03565934_03569916 EEF2B, EEF2L2, EEF2.1.L, EF2, EEF2 coding downstream 360725 3565785 ~ 3570730 (+)
G158767 NA non-coding upstream 39101 3163243 ~ 3163472 (+)
G158681 NA non-coding upstream 232343 2968657 ~ 2970230 (+)
G158676 NA non-coding upstream 294057 2908295 ~ 2908516 (+)
G158774 NA non-coding downstream 1938 3206998 ~ 3207286 (+)
G158766 NA non-coding downstream 6723 3211783 ~ 3212301 (+)
G159234 NA non-coding downstream 36436 3241496 ~ 3241775 (+)
G159261 NA non-coding downstream 111901 3316961 ~ 3317302 (+)
CI01000030_03018776_03042194 FGF22 other upstream 158800 3018776 ~ 3043773 (+)
G158416 NA other upstream 588280 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 920203 2277208 ~ 2282743 (+)
G157726 NA other upstream 1564346 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2195886 1003114 ~ 1003795 (+)
G159685 NA other downstream 1226740 4431800 ~ 4488526 (+)
G159816 NA other downstream 1311718 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3994875 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4649025 7868292 ~ 7886228 (+)
G162088 NA other downstream 5032905 8237965 ~ 8239604 (+)

Expression


Co-expression Network