CI01000030_03838027_03838812


Basic Information

Item Value
gene id CI01000030_03838027_03838812
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3836328 ~ 3840945 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03838027_03838812.mRNA
GTACAAAACGCAAGGTGCGCAAGACTAGAAGATCTGCGCATACTCTCATGCTACTGTTGAGATTTTGATAATATGCATTCTGTGGATCCAAAATTATTTAAACAGTTAAGGTATGAATTTGGCATTACGTATAGCATATGGTTAATATGGTTAGCTAAATACATAAAACCATAAAAAACTTGATGTACTAAGATAACTGAAACTGAAACTAAAAATGAAATAAAAATAATAAAAAATGAATACAAGCTATATAGACATTTTTTAAAAAAATCTAATAAAAGTAGCAAACATTTACAAAAACTTTAACATTAAAATGGAAAATATAAAAAACTATAATAGTATCTAATGATACTAAAATAACACTGACACAGGCATATATCAAATTAAGTAGCATTTAATTTTAAATAAATATAGCACATAAAAGTTTTAAGTTAAACTATTCACAAAAGGTTGTTAGGTTCTAAGTTATTAAATAATCAATACACTAATTAAAGTTCACATTTTGGGGTTTCTGTTTTGAAAAATAAAATAAATGATAAAAAAAAAAAATAATAATAATACAATAATCCAAGTCTGAGACTTTTGACTTAATATATCCACAAAGCATGAAAAAAGTCTTTTGTTTGCACATGACACTTGTTTGATACTGAGTTATCTAATGCAATGACATTCAGACATTTGTAAATGTGACTACAAGAAGTCTTTAGAAAACTAAATAAACTAATTAAAAGACCCATATGATTGAGTGGAAGAAAGTGATGTTTTATCTGACCTTTTGTCAGGAAAGGAAGCTAAAATTAACACTATCAGCATAGAGACAATACAATGTGTTAATGACATCAGAGGGGAAGTCGGTCTAGGTCTTAGGTCTAATGTACAGTTTGTTAGCATGGCATTCGTTCTTACTAGATCTCTCTGTCCTCCACAATAAATAATTCTTCCACTGGTAACCCACAAAATGACAGCTTATCAGACACTGTGTGGGTTCTTGGAACCCCCAGTGGGAAGTCTCAGGTTCCGATCTTGTCTGAATCACCCCAGTGGCCGCACTCATGTCCTGGATTCTGCACACGCCCCCAACACTTCATAGTCACTTTATAATCAGCCTGTTGCTATTAGCATTGCTCAAGTGTTTTTGAACTGTCAGTGGTATTGCAATTGCTAATAGGCAGAGAGCTGAAACTGAAAGTCCTTGACATAGACTTTGATGCTTCTACAGGTTTTAGTAATAATCTGAAACAATTGTTAATACTTGAATTTTAAATTAGCAAGACATGCAGCTGTTCAACTGACTAGCGCAACTGCAACAACAACAATAGTCACTACAAAGGGATTTTTTGTCCTATTACCTCATCTACAACCCTACTGACAAAAACATTACACAGTTTTAGGTTCAGCTGTGTGGCACCTGTAACCAAACTGGTCTCTAGGTAAAGGTCAAGACGTTTAACAGAAATTAATTTGCTATGACACTCGTAACCTATTGCAGATTGTATCAATGACTGTAATATGACACATAAATGAATCAATAAGACCACCTGCAAAGGAAATAACTCTGCTCTTTCGTCATAGGTAAAGCTCCTGGTGACAGCATGACTGAGAAGTGAGTCTAATATCTGACTAACTCCAGACACCACACACAGAAAGAGTGTATGTGCATCTTGCGTGAAACCAATCAGAAAGTTCCTACCCGGTGAAAATGGAGTCCGCTTTCTCACGGATGAGGTGGGAACCTGATGAAGAGGCTGAAGAGACCTCCTTGAGAGGTCTGGGATTGCGTCGCAAACGGGAGTTCATCCCCGAGGAAAAGAAAGATGCGACTTACTGGGAGAAACGCCGCAAGAACAACGAAGCGGCGAAGCGCTCGCGAGAGAAGCGAAGGGTCAATGACTACGTATTGGAGACTCGTTTGGTTTCACTGAGCGAGGAAAATGCCCGTCTACGAGCTGAGCTGTTGACTCTAAAGCTTCGGTATGGTTTGCTCAACTCTGGAGCCCCCTTCTCTTCATCTCAAAGGGCTCTATCTCAGCTTCACTCTTTGGCCCCACAACCCCTGGTTTCTTGCCCAGACAAAGATCTCTACTGGGGTAGAAGGCAAGAGAGAGAGGCTTCCAATCTATTGGGGAACCAACAAGCACCCGTCTGTCTGGGTACCCACCCTGGGTCGGCATTCCTTCCCGCGCAGCCTATGGCCATGAGAAGAAATCAACCATACTTCCTAGACTTCCCCACCCTCCATTCTCCTACAGCCGCACCTTTACTCTTTCCACCACACCTTGCCCCAGCAACAGCACCTTGGGCAGGACGGCCCCTGCTCCAGCCAGGGAGTCAGAGGATCTTGTCGGACGACGAGGGGGAGCAGCAAGTGCCGGCGGATTCCAGCACTGCCCTGCCCCATAAACTAAGACTGAAGTCGCAAAACTCACAGCGCAAAGACAATGGAGCTAAATCTGCATCTCCTATTCCAGCATACATGTCAGATTGAAATCAAACTGTCTAAAATTACTCAGCAGATATGAATCATCCTTAATTACCACATTTGTGGTATTTAAACTTGGCTATATTCCAGGACGTTTGTTGTAAACCATCTGATAAAAGAAATATTTCTTTGATCAAAAGGTCAGATATACAGATATAGTTTCCAAAATTCATTTTGAAGAGTCAGTGTTTCCAGTATTGAAGTAGAAAGAGGCAAACTTGAATTAGGATAATGACGCACATTTTTAAGTACTTGAAATGTTCCACCTCTTTTTTACCTTTAGCATAGACAGGAAAGTAGAGATGAAATAAGGAGAATAGGATCAGGACTTGACCCAGGTCAGACTCAAACCAGAGTCATTTTGAGCTTACAGCTTTGATGTCAGATTGACATTTTCGCATTTGACAGATGCTTTAAGCTAGTTACGTTGCATTTAGTATATATATATATATATATATATATATATATATATATATATATATATATATATTCATGCATTCCCTATTACAACAGAAATGTTGTAATGTTCATGTTGGGGGGGTGGGGGGGATCTCAAAGAGGTTGGATCTGATGCTGATAGCATCCATTTGCAATTTCTTTCAGAACATCAATATATGTCTCTGAGTGGCCTAAAATATTTGGTTAACCAAAAATCAGATGCATGCAAATGAGATTTTAGGGAAACTCGCCACACCTCAAAGAGTCTGAAAGGAGGAGCTAAGAGGATCTTTCTGGAATCCTTTAATTGTTCTGGTTCTTAATTGTTTGATGCGTGTCGCTGGCTATGTCATGTGACATCTCAGTCATGAGACTTTTTTTTGATATGGCTCCTGTGTTTGGAAAGGTGTTCATGCACAAACTAAGGTCATCTGTGACCAAAATAGTTGCTTGCTTGCTACACAAAGTTAAAGTTGTCATCCCATAATATGTGGCCTGTAATTTCTGCCATCATATCTTTTAACATGTTTTGAGTTCTGCATATGACCCAGTGCTACACATGAACATACAGTGCCTTTGCACAGTGTACCTGCTGTAAACTAGTCTTAATTCAATTTCATGTAATTTTTAATTACACAATACATTATTTATAGTTTTTGAAAGACTTGGAATTATAAAGTGCTGATCTTTGATGACGACGAAATTCTTTTGTTCGATTTATAGCGTGTAATTTTAGATTAATGCATGATCATTGTTATCTTTTAGAGACAAATGGCTCAAACATAGACTGACCAACAAAAACAACTTCCAAATCTCAGGCATTTTGTTTCTGTTGATGTTAAAACATGCACAGGGGCTGCTAAGAGCTTTTTTGATAACCTTGCAACACATTTGAACTTACTTATAAAATCTTCTCAGTCTTCTTTATTCTTCTCAGACACTTTATTCAAATGGTCTTAGCAACAGATATGCTAAGTTCTTGGTAAGTGCTTGAAGACCGATCTTCATTTTATAAAATAATTTACAAGCTATTTGTCCACAATGTATTCTTTTTCTTTTTTGGTACATTCTTGAATGACAACATAGCTAATGCAGTTAGCATTGGCACGCTAACTGCATTAGCCATGTTAGCAACAACAGTGGCTGACAAAGCATTAGCAGCTAATTAACAAGGAGGATATCTAAAACCTTGTGTCACTGACTGACCAGCTCATTTTCATTTAGAAATACAGTTTATGAATGTAAATCACTTTTGCTTATATGTCATTTTAGGTTCACAACTCAATAATGAAATATTGAATATAGAAAGACAATCAAAAAAATTATTAGCCTAGTTTGAAAACGGATTACCTTAAGTCTTCTCTTAAGGTGCGTTCAGTTCATGTAGTTATTTACCGTAATTACAAGATTTCAACTTGTAAAAGGCATTCACGTTCTTGTAGAGCTTGTGATTACAGCTTGTAAGAATGGGTGCGTTTGACTTGAAGAGGCACTGCACAGATCGATCGGTGTATGACATTAAAGTACTGCGAGAGTGATTAATGAGCAGACATAGTGTTGTGCTAATAGTTGAGCTACAGGAGCAGCACTTATGTACTTTTTAAAAAATAATTTTAACACATTTTTACAAAGATTCATATTTTATACATTTTGTCATGTTGCATTAAGCTGTATGATCTTCAGAGTTTTTTCATTTTTACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03838027_03838812.mRNA True 4618 mRNA 0.37 1 3836328 3840945

Neighbor

gene id symbol gene type direction distance location
CI01000030_03825765_03826754 NA coding upstream 9534 3825415 ~ 3826794 (+)
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 57296 3765062 ~ 3779032 (+)
CI01000030_03744173_03745628 FOXQ2 coding upstream 90587 3743491 ~ 3745741 (+)
CI01000030_03715463_03716370 NA coding upstream 118759 3714611 ~ 3717569 (+)
CI01000030_03703231_03704355 NA coding upstream 131713 3701601 ~ 3704615 (+)
CI01000030_03909138_03910046 NA coding downstream 68093 3909038 ~ 3910046 (+)
CI01000030_03915675_03916993 NA coding downstream 74341 3915286 ~ 3916993 (+)
CI01000030_03917423_03918481 NA coding downstream 76478 3917423 ~ 3918674 (+)
CI01000030_03926592_03926762 NA coding downstream 85647 3926592 ~ 3927205 (+)
CI01000030_04070253_04083457 NA coding downstream 228502 4069447 ~ 4083892 (+)
G159556 NA non-coding upstream 11777 3824287 ~ 3824551 (+)
G159553 NA non-coding upstream 16282 3819821 ~ 3820046 (+)
G159552 NA non-coding upstream 19329 3816762 ~ 3816999 (+)
G159548 NA non-coding upstream 24348 3811732 ~ 3811980 (+)
G159547 NA non-coding upstream 25114 3810733 ~ 3811214 (+)
G159561 NA non-coding downstream 2843 3843788 ~ 3843996 (+)
G159484 NA non-coding downstream 11047 3851992 ~ 3919867 (+)
G159490 NA non-coding downstream 65136 3906081 ~ 3908489 (+)
G159593 NA non-coding downstream 93178 3934123 ~ 3934444 (+)
G159604 NA non-coding downstream 133285 3974230 ~ 3974587 (+)
CI01000030_03018776_03042194 FGF22 other upstream 792555 3018776 ~ 3043773 (+)
G158416 NA other upstream 1222035 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1553958 2277208 ~ 2282743 (+)
G157726 NA other upstream 2198101 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2829641 1003114 ~ 1003795 (+)
G159685 NA other downstream 590855 4431800 ~ 4488526 (+)
G159816 NA other downstream 675833 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3358990 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 4013140 7868292 ~ 7886228 (+)
G162088 NA other downstream 4397020 8237965 ~ 8239604 (+)

Expression


Co-expression Network