CI01000030_03909138_03910046


Basic Information

Item Value
gene id CI01000030_03909138_03910046
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3909038 ~ 3910046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03909138_03910046.mRNA
CTATAAATCTCTGAGGATGCTCTTTCAGTCACAACTTTCCACAAACAGGTAATAAACAATATATTTGACTACTTTTATATATAGTAAGACAGAGCACAGCATGGCAGCAACGCACAAGAACATGACGGTGACGCGCACCATCAGTGTTGGAAACTGCACGGGGCCGAGTGCCGACAGCGAGTCAGAAAGCGCGGGTTTCCCGTTCGCGCGCAGGCACAGCTCTGCGGGAATACTCGCGCTCAAATGGGCCACCGCGAGAAGTTGTTCGTTCGGAAGTTCGCTGGGGTTAGAAAGCCGCGGGAGTAAAGACAGTATACGCAGTATCGTCGTGACCCCGGACAGTATCCCACAATTCACCATTCCAAAACTCGCCCTGGAGGATGGCTATAGATCCAGAGCGATTGAGAAAGAACGACAGGGTGAAGAAGAGATGGACTGGGGGAGCAATGAAGACATTAGCGGATCCTACCATGCCCAGCTTTCTCTTTCTTCATCAGTGTCGTCGTCGTCATCATCCTCTGGGTTCAGCGTATCTCCTGTACCTGGAAGAAAAGCTGTCTCAGATCTCAAACATTGCTCTGACTCTGCTAGCCAAGCGGCTCTCTCCTTACCTCACCTTCCCAAGGTCACCACCCCATACGGCTTTGTAACTTTGAGCAAAAGCCCACAAATGGCCAACGAAGAGGCGCTCTTCTCCCAGGGACATAGGCGTTGGGGTCACGATGAAGAGGTCAACACATCTAGGCATCCTAAGCTGGAAACGAAAAGAAGCATCACTGTCAGGACATCCCCCATTCAGATACATACCAGCACCCCTCCACATCAGTCTCCTGTCGCGCATCGTTTCTTCAGAAGCCACAGCGTTACAGGAATCGAGATCCAGAAGCAACTGGCTCAGAACTGTGAGTTAATAAGACAAGCACCGGTCAGCAAAAGCAAGCGAAGCCTTTGGGGAATTCTTCGCAAACAAGAAAGAAAGTCTTTCGACTTCAATTTAAACCATAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03909138_03910046.mRNA True 1009 mRNA 0.50 1 3909038 3910046

Neighbor

gene id symbol gene type direction distance location
CI01000030_03838027_03838812 NA coding upstream 68093 3836328 ~ 3840945 (+)
CI01000030_03825765_03826754 NA coding upstream 82244 3825415 ~ 3826794 (+)
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 130006 3765062 ~ 3779032 (+)
CI01000030_03744173_03745628 FOXQ2 coding upstream 163297 3743491 ~ 3745741 (+)
CI01000030_03715463_03716370 NA coding upstream 191469 3714611 ~ 3717569 (+)
CI01000030_03915675_03916993 NA coding downstream 5240 3915286 ~ 3916993 (+)
CI01000030_03917423_03918481 NA coding downstream 7377 3917423 ~ 3918674 (+)
CI01000030_03926592_03926762 NA coding downstream 16546 3926592 ~ 3927205 (+)
CI01000030_04070253_04083457 NA coding downstream 159401 4069447 ~ 4083892 (+)
CI01000030_04163915_04171784 CRLF1B coding downstream 253869 4163915 ~ 4171907 (+)
G159490 NA non-coding upstream 549 3906081 ~ 3908489 (+)
G159561 NA non-coding upstream 65042 3843788 ~ 3843996 (+)
G159556 NA non-coding upstream 84487 3824287 ~ 3824551 (+)
G159553 NA non-coding upstream 88992 3819821 ~ 3820046 (+)
G159552 NA non-coding upstream 92039 3816762 ~ 3816999 (+)
G159593 NA non-coding downstream 24077 3934123 ~ 3934444 (+)
G159604 NA non-coding downstream 64184 3974230 ~ 3974587 (+)
G159631 NA non-coding downstream 116488 4026534 ~ 4028557 (+)
G159714 NA non-coding downstream 218337 4128383 ~ 4128777 (+)
G159727 NA non-coding downstream 228937 4138983 ~ 4139239 (+)
CI01000030_03018776_03042194 FGF22 other upstream 865265 3018776 ~ 3043773 (+)
G158416 NA other upstream 1294745 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1626668 2277208 ~ 2282743 (+)
G157726 NA other upstream 2270811 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2902351 1003114 ~ 1003795 (+)
G159685 NA other downstream 521754 4431800 ~ 4488526 (+)
G159816 NA other downstream 606732 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3289889 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3944039 7868292 ~ 7886228 (+)
G162088 NA other downstream 4327919 8237965 ~ 8239604 (+)

Expression


Co-expression Network