CI01000030_03917423_03918481


Basic Information

Item Value
gene id CI01000030_03917423_03918481
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 3917423 ~ 3918674 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_03917423_03918481.mRNA
GTTCACAGAGACGATCCGGTATCAGATATATCCATGCCACATCCTAACATTGAGCAAAGAGTGGTCCATTTCCCACAATGCACAGCTACGGATCAAACTTCCACCTCACAGCATGCTCAGACAACTTCAGAGCCTTCACATGGGGACACCACTGAAGTATGCCAACAGCAAACAGTAGCTGATCTTCTGGAGAAAGGTTTTAGTGTGACTGTGGTAAGAGACTTTCCATTGGGAACACTAGAGGACTTTGTTGAGGAAGGACACTCTTTGCACTCTACCCTTCCTGAGGTTTATGAGAGGAGGCTTTGTCTTCTTGCCCTCCAGTTGGTACAAGGACTACAGCAGCTGGGACATTTTAAAGTAAGGGAACTGAAACCACAGAGTGTGACTTTAGTGTGGCCGCCTATCACGAGTAAGGTGGCTGACACTAGGGAATACCCTAGTGAAATGAAAAAGGTAAGGGATGTGGACACTTCTGAAGGTACACCCGGGATCACAGTGTCCAAAGAGCAAATACACAACAAGGGGACGAAAAGTGAGATTTGTCAAACCTTATGGGAAAAATGGGGCACCCCTCGTGTGGTCTTGAAAAGCCATTTTGAGGACGAAGTTTTTCAAGAAGCAGCATCCCAAGAGTTCCAGTTGGGGACTTTGCTGATGTACTGCCTACATCTCACTGAAGATTGCTCATCTGTGTGGAAGTTGCCACAAGACACTCCATATACTCCAGGTTTGCTGTGGCTGGTCACCCAACTTACATCTGAGAAACCTGGACTACTATTGGCCGATGTGGCAGGTGTCCTCAAGGCCTTGCTTTGGGGTCCACGACAGGGACTTTTTCAGCAGAACCAGCTGGAGAGCTCTGTGTTTTCTAATTGGCTGCTACTTAAGCGATCTCTTTTAGTCCTCAAGCTTGCAGAGAAAGGACTCTTTCAGGATCAATATGGCTTGGACTGGGAAGACTATCTCTGCCTGCAATACCTATCCCTTACTGACCCCAAGACTATGCGTAGCATAACTGAACGCATGGGCCTTCATGACTTTATTAGACCAGCTTAACATAAAAATACAAATGTTAACATTTGTTAGTTGGTGAGCCTTAGATATAGCTGTAGATTAATGTAGCTATATACCCTAAATTAAGTTTTTAAATCCTAAAAACAGATCACCTTGTAGCATATTTGTAATTCATATTCATGTACTGCTGTATACTTCCTATCATAAAACCTCAAAGAAAAACAAAACATGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_03917423_03918481.mRNA True 1252 mRNA 0.44 1 3917423 3918674

Neighbor

gene id symbol gene type direction distance location
CI01000030_03915675_03916993 NA coding upstream 430 3915286 ~ 3916993 (+)
CI01000030_03909138_03910046 NA coding upstream 7377 3909038 ~ 3910046 (+)
CI01000030_03838027_03838812 NA coding upstream 76478 3836328 ~ 3840945 (+)
CI01000030_03825765_03826754 NA coding upstream 90629 3825415 ~ 3826794 (+)
CI01000030_03765594_03778884 ONECUT3, ONECUT3A coding upstream 138391 3765062 ~ 3779032 (+)
CI01000030_03926592_03926762 NA coding downstream 7918 3926592 ~ 3927205 (+)
CI01000030_04070253_04083457 NA coding downstream 150773 4069447 ~ 4083892 (+)
CI01000030_04163915_04171784 CRLF1B coding downstream 245241 4163915 ~ 4171907 (+)
CI01000030_04183583_04213798 CPAMD8 coding downstream 264909 4183583 ~ 4213798 (+)
CI01000030_04219745_04223677 ODF3L2 coding downstream 301071 4219745 ~ 4224790 (+)
G159490 NA non-coding upstream 8934 3906081 ~ 3908489 (+)
G159561 NA non-coding upstream 73427 3843788 ~ 3843996 (+)
G159556 NA non-coding upstream 92872 3824287 ~ 3824551 (+)
G159553 NA non-coding upstream 97377 3819821 ~ 3820046 (+)
G159552 NA non-coding upstream 100424 3816762 ~ 3816999 (+)
G159593 NA non-coding downstream 15449 3934123 ~ 3934444 (+)
G159604 NA non-coding downstream 55556 3974230 ~ 3974587 (+)
G159631 NA non-coding downstream 107860 4026534 ~ 4028557 (+)
G159714 NA non-coding downstream 209709 4128383 ~ 4128777 (+)
G159727 NA non-coding downstream 220309 4138983 ~ 4139239 (+)
CI01000030_03018776_03042194 FGF22 other upstream 873650 3018776 ~ 3043773 (+)
G158416 NA other upstream 1303130 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 1635053 2277208 ~ 2282743 (+)
G157726 NA other upstream 2279196 1636867 ~ 1638227 (+)
CI01000030_01003310_01003776 NA other upstream 2910736 1003114 ~ 1003795 (+)
G159685 NA other downstream 513126 4431800 ~ 4488526 (+)
G159816 NA other downstream 598104 4516778 ~ 4517381 (+)
CI01000030_07200104_07202258 GCGA other downstream 3281261 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3935411 7868292 ~ 7886228 (+)
G162088 NA other downstream 4319291 8237965 ~ 8239604 (+)

Expression


Co-expression Network