CI01000030_04588910_04589122


Basic Information

Item Value
gene id CI01000030_04588910_04589122
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4587884 ~ 4589177 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_04588910_04589122.mRNA
GTATTAATACATGCAAAATGCTTAAATTGTCTTTTAAGCATTTAAATGAATCCAATCAGTCCATCTGCTGTCATTAAAATTAGAAATCATTTCTAATATTAGTGTGTTGACTGAGAATCAATCGGGAAAGATGAATTTTGTTTTGCAATAATATGTTTATAATTAATGAGAAATAAAAGAAAAAATATCATTATGTCCTGAATTATTATAACATAAACTGTAAATTTTACTTAAGGCTAATATTTATGTTTATAATCATCACCAGCATCAAACTAGATACGAGGCATTTTCCATGAATAGGATACAAAATTACAAATACAATTTTTATTTTTATTTTTTTTTTTATTCCTCTACAAATGGTTGAAGGAGTTGGTTAATCTTCAGAAAATACTGATTGTGAACCTCAGAAAGTAAAAACTACATTTTACATTTTTATTTTCTATTCATTTTATATGTAGCTTGTAAGTTTTGCCACAGTGTTACCAAAATGTGCCCCAAATTTACCAAAATAACCCTGTTACCAATAAATTATATTTAAATTGTGTCTAAAAACTATTTGAGTACAATTTGTTGGTGCGACTTGTGCTATTTCCTACCAATAAGCATGAAATAAACATTACATTTGGAAAAACTAAAAAAAAAGAAGAAAAAAAAAGAAAAGAATGAGTAACAGGGTTGCAAATTTAGCTTAAATGAAGCTGTTACTCAGTATCTACATTTTTGAGACTACATTTTAGGTACTGATCAACATATTTTTTACAATAATTTGGGTAACAAGGTTGAAGTTTGAGCTTGACGAATGTAGTTAACACTACGATTTGTATAAAAATTGAGAAAATACATATATTTATATACATTTATACATAGAAACTGCCTTTAACTTTAATATCAGTAAACTGGTTTTCTATGTTGAAATTTTAAATCTTGTTCTTTTTTCATTCTTTTTTTCACAAATTTAAATTTTGGTTGAATTTTATTTCCCTTTTCCTTGTCTTTTATCTCAATGTTCTTCAACTCCACCCTATTATGGTTCCAGGCCAAAAGCAAAACAAGGATGAAGCGATGGACTACATCAGTGAGCTGTACCTTAGAGAAGCTTCAAACCGTGGAAATGGAGTACGGAAGCAAATTTACAAACACTTTACCTGTGCAACGGACACCGACAACATCCGCAAGGTCTTCTGTGATGTCAAGAAAACGGTTCTCATCAAGGAATTGCAGTCTTACGGTATGCTTTAAGATGCTGAGGGGCTTCATCTGGCACCCCAATCTGAACTGCTTCCTGGAAAGACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_04588910_04589122.mRNA True 1294 mRNA 0.30 1 4587884 4589177

Neighbor

gene id symbol gene type direction distance location
CI01000030_04575377_04586894 GNA15.1 coding upstream 957 4575074 ~ 4586927 (+)
CI01000030_04552559_04571086 NA coding upstream 14883 4549946 ~ 4573001 (+)
CI01000030_04454078_04461414 NA coding upstream 125770 4451936 ~ 4462114 (+)
CI01000030_04393891_04405162 NA coding upstream 182266 4391950 ~ 4405618 (+)
CI01000030_04362878_04366419 PLPP2, PLPP2B coding upstream 220588 4362878 ~ 4367296 (+)
CI01000030_04708812_04716224 NA coding downstream 119400 4708577 ~ 4717703 (+)
CI01000030_04730959_04734987 NA coding downstream 140524 4729701 ~ 4734987 (+)
CI01000030_04794796_04802874 DDX59 coding downstream 205465 4794642 ~ 4802932 (+)
CI01000030_04804199_04820916 KIF14 coding downstream 215022 4804199 ~ 4821266 (+)
CI01000030_04822608_04834394 NA coding downstream 233431 4822608 ~ 4834400 (+)
G159816 NA non-coding upstream 70503 4516778 ~ 4517381 (+)
G159748 NA non-coding upstream 258352 4329277 ~ 4329532 (+)
G159744 NA non-coding upstream 263783 4323890 ~ 4324101 (+)
G159742 NA non-coding upstream 268310 4319170 ~ 4319574 (+)
G159741 NA non-coding upstream 269111 4318377 ~ 4318773 (+)
G159858 NA non-coding downstream 28166 4617343 ~ 4617551 (+)
G159863 NA non-coding downstream 44011 4633188 ~ 4633460 (+)
G159841 NA non-coding downstream 88987 4678164 ~ 4680912 (+)
G159836 NA non-coding downstream 148625 4737802 ~ 4738938 (+)
G159887 NA non-coding downstream 155853 4745030 ~ 4745324 (+)
G159685 NA other upstream 99358 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1544111 3018776 ~ 3043773 (+)
G158416 NA other upstream 1973591 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2305514 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 2610758 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3264908 7868292 ~ 7886228 (+)
G162088 NA other downstream 3648788 8237965 ~ 8239604 (+)
G161986 NA other downstream 3955405 8544582 ~ 8548325 (+)
G162137 NA other downstream 3978833 8568010 ~ 8571726 (+)

Expression


Co-expression Network