CI01000030_04708812_04716224


Basic Information

Item Value
gene id CI01000030_04708812_04716224
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4708577 ~ 4717703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_04708812_04716224.mRNA
ATATAAAAGGAAGCCAGATATGGTCTGATCATTGGAGGGACTTCTAAAAAAAGGTTCTTCTAGTGCCACCTGTTGACTTTTGGGGTCAGATGAGTTTTAATTTGTTACTCCATGGCAGTTTTAACAAGCAAGGTCCCACCATAATTTTTAAAAGCACTGCAATTATTAATCAAGATTAATAAACAAAATAAAGAGGAAACAATGAGGTAATGCTCATAACAAGATCTAAAGTAATATGTATCTATTTATCATCATTAACGACCAGGTACTCGTTAAAATCCGGGGATACGTACGTTTCGTGAGTCCCGAAGAAAAAAATGGGGATCTTATTAGGTGGTGGTTTGACAGCTCCTTCTGCAACATCTTCAATCTGGAAGAAAAATACAGCCAAAATCGTACAATATGTGGTCCGTTTTTCAGGCCGAAAGAGAGTCCTGCTTCTGATACAGTAGTTAAATCGCTAACAATGAAGAAGTTTTTCGATGACATCAAGAAGGATATAAAGTTCAAGTCAGCAGGGCCAGGAAAGAAACTTACAGAAGACACAAGCTCTAAACCTGAAGCCTCGCAGGTTGCTCACGGGGCGCCCAGAAAAGCGCCCACAAAAGCGCCCACGAAGGGTGCACAGATGGCAGGGGCCGCCGCCCTTGCCAGGATCGAGCAGCAGCACCGGCCAAAAGTGCAAACATCACAGGATGCCATAAGGAATCAGGGAGTGTTCTTCATCTGTCCTCTGACTGGAAAAACCTTAACAAAGACTGAAAGAGAGATGCACATCAAGGAAGCTATTCTTATGAGGTTCTCAGATGATGCATTGGAGGCCTCCATTATGATGATTCACACCTTCAATAAAGACAAAGAGAAAGTAAAGGCCGCCATTGACATCATTAGCAAGTACATCGAAAATATCTGTAAGAATCCGACTGAGGAGAAGTATCGGAAGATCAAGCTTAGCAACAAAGTGTTTCAGGAGAAGGTCAGTGTGATTGAAGGATCTCGTGAGTATCTTCAGGCCGTGGGATTTGAAAGCACCGCGCTGCCGGTAGATGGCGAAGATAGGACTGAGGAGTACCTGATGTTACCGCCACAGGAATCGGATGCTCTGGAGCAGATAAAGGTTCATTTGGAGCGGCTGCAGAAAGGCGAGCCAGTCAGAGCGAAGCTGGACCGCCAGCCGCAGGTCTTCAGACCGTCGCAGCATGCTACACACTTCGAGTTGCCCCCAGACTTCTACAATCTGACTGCGGAGGAACTGAAGAAAGAAATGCAATTGAAGAATGAAATTGTAGAGAGAAACGCAATGCTGCGAACGAAAGCCATGCGTGAAAAAGATGAGCAGAGAGAGAGAAGAAAGTATAACTACGCCCTTCTGAGAGTGCGGTTACCAGATGGAAGTATACTTCAGGGTACTTTCCTGGCATGGGAGAAGGTGGCAGCGTTGTACCAGTTTGTGCGTGATTCGCTGGAGAATGGCTGGCAGCCCTTTGAGCTGGTGGCACCTGGAGGACAAAAACTGAAAGACGACGAGTCGGCTCTGAATGAGTGCAACCTGGCCCCAGCAGCTCTGCTGACCTTCACGTGGGACGCGGCAGTGCTGGCAGACATTGCTGCCGCAGGAGGAAAGACTGCTGCTCTGCTTAAACCAGCATTATTAGAGAACATCAAGACCATGAGCTGAACATTTAGTCTTGCTTTCTCCCCGGTCACTGCTGTCCCGCCTGCGTTCTCTTGCCGCTCCTAGTGACTTTCTCTCCCATCGTCCACAACCCCACACGGTTTCATAGGATGAGCAAGATACATTGGTTGTGTCCACAACATGTGTTAGATGGATTTATATAGTGCTAACCACAGGAGTTGTTTCCTGTCAGTGATGTATTATGGAAAGTGTAAGCACCTTAAGGGCCTCAATAATCTGTCCTATTATAATGCATTGTTGCTTAAAGTAACATGACCAGTCATCATATGATAATGGAAGAAGCTCCGTTTGTGCACTGTGCCGCTGTCAGACTGGAAATGATCTGTAAGTGGATCTGTTGTAATTTAAAGCACTTTTTAGTTATTGCTTAGAGAGAAATGTTGATTAATGTACCATAAAATCTCATTGTGACAACGGTTTGAAATTGATCTAACATGAGCACTACCAAGTTAAGATTGTCTTTTGTGTTGTATTGAGGTTCTGTTTCCTGCTTAACAAAAATGAGACTATGCATGAATGTTTTAACGCAACTTAGACAAAACGCTCTGGGGTGCGTTTCCCGAAAGCATCATTAGCCAACTATGGTCGTAAGTCACATTGAACTCTATTGGTAAAGACGGAACTTGCGACCATAGTTCGCTTTGGGAAACGCACCCCTGTTCTGAAACAACGATCTACCTCCTAATACAGATAAATGTCAGTTCATTTCAGCTGTCACCATGTCATTTGACTTACATAATTAAGCCCAAAGTATTTGTTTTTACACATGCAACACGTTTGACGTAAATTTGATCAACTACATAGTAAGCTCGCACCCAGATCTTCCCCCCAATTGCATATACTATACGCTCACCTTGCACGTGAAATTTTTTTGCAATAATGATTTTGTCCACAAGGTGCCAACACTGGCGACCATGGTGTCACAATTGAAAAGAAATGCTCTTTGTCATTGACAAGCACTTGTGGGAGGGGGTTAAGAGAAACTCTAGTTTAAATGAGTATAAAGACATTATCGCTCATAACTTCTGGAGAGAAAGAGTGCAGACACTGGACAAGAATGAAACTTTCTATTATGCATGTGTGAGCGTCTGTTAATGCACACAATCCAATCGAGTATACTTTGAAAGGCTGTGTTCACATCAAAACTCCAGCTTATTTTTCAAACTGGAAGTAAGCTGTTTACTGTGAATATGCAAGACTTCAAATTCATTAGCCACTATAGGTAAATAAGTAGAAGAATAACGGCAGTAAACTGTAAAACTATTTTAGCTACAAACCAGTGCATTTATGATTATGACAAAAAGGCACCCGCTCTGATGGAAAAAAGTGAAGTGGATACTATAATGCTCACTGATTAAACCATGCTATATTGTTGAAAATGAACCATGCTTGTATTTTACACTCACTCAAATTTGTAGAGTTTAAATGTTGTGTTCTAATGCTTTTGATGTGATGTCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_04708812_04716224.mRNA True 3157 mRNA 0.43 12 4708577 4717703

Neighbor

gene id symbol gene type direction distance location
CI01000030_04588910_04589122 NA coding upstream 119400 4587884 ~ 4589177 (+)
CI01000030_04575377_04586894 GNA15.1 coding upstream 121650 4575074 ~ 4586927 (+)
CI01000030_04552559_04571086 NA coding upstream 135576 4549946 ~ 4573001 (+)
CI01000030_04454078_04461414 NA coding upstream 246463 4451936 ~ 4462114 (+)
CI01000030_04393891_04405162 NA coding upstream 302959 4391950 ~ 4405618 (+)
CI01000030_04730959_04734987 NA coding downstream 11998 4729701 ~ 4734987 (+)
CI01000030_04794796_04802874 DDX59 coding downstream 76939 4794642 ~ 4802932 (+)
CI01000030_04804199_04820916 KIF14 coding downstream 86496 4804199 ~ 4821266 (+)
CI01000030_04822608_04834394 NA coding downstream 104905 4822608 ~ 4834400 (+)
CI01000030_04956344_04956706 NA coding downstream 238603 4956306 ~ 4957238 (+)
G159841 NA non-coding upstream 27665 4678164 ~ 4680912 (+)
G159863 NA non-coding upstream 75117 4633188 ~ 4633460 (+)
G159858 NA non-coding upstream 91026 4617343 ~ 4617551 (+)
G159816 NA non-coding upstream 191196 4516778 ~ 4517381 (+)
G159748 NA non-coding upstream 379045 4329277 ~ 4329532 (+)
G159836 NA non-coding downstream 20099 4737802 ~ 4738938 (+)
G159887 NA non-coding downstream 27327 4745030 ~ 4745324 (+)
G159888 NA non-coding downstream 28948 4746651 ~ 4746935 (+)
G159889 NA non-coding downstream 32938 4750641 ~ 4751246 (+)
G159892 NA non-coding downstream 52882 4770585 ~ 4784656 (+)
G159685 NA other upstream 220051 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1664804 3018776 ~ 3043773 (+)
G158416 NA other upstream 2094284 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2426207 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 2482232 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3136382 7868292 ~ 7886228 (+)
G162088 NA other downstream 3520262 8237965 ~ 8239604 (+)
G161986 NA other downstream 3826879 8544582 ~ 8548325 (+)
G162137 NA other downstream 3850307 8568010 ~ 8571726 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_020423 ubxn6 coding NC_007133.7 CM002906.2 22260210 ~ 22274393 (+)