CI01000030_04730959_04734987


Basic Information

Item Value
gene id CI01000030_04730959_04734987
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000030
NCBI id null
chromosome length 11638347
location 4729701 ~ 4734987 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000030_04730959_04734987.mRNA
ACATATATGGGGCGTACTTCGACACACCACCACGAATACTGGAAAAAATAAACATTATAAGTGAGGAAAGTCACATTTTGTGTGAAGAAAAATAGATTGTCAATAACAAATCTGAGCAAATAGCTCACATGCTAACATGCTAATTAAGATCATAAAACCCTCGACAACCCCAAATGCTACATGGAAAAGTCATTAAAATTATATTCTTAATGTTTTTCAGAGAAACTGAGCTAAACAAAAATTGTTTCAGAACTAATGTCAGGTAATAAGTGGAGTGTTTTCACACTTTTCTGCAATTAGCCACCTATGCGAGCTCCCTGCCTTTATTTACCACACTATATAGACTCTAATAATACTTTAAACCAGTTTTAATTCACAATAAACATCAAACCTCTGCGTGGAGTGGAGGCTAAAGGCTCTTCAGCCGCGAGCATCACGACCACCATCCGCGCGCCTTTCAGCTCCGTGCGCTCGCGCTGTCCTCTCACTGGAAACGTTAAACGGAAACGGGGAGCGCTTTTTTGGACTCCGTACACAACTTCTTAGATCTAGTCATCGACTCCACGTCTTTTAAAGTTGTAGCATTAACGTGTCAACTGCAAATTCGATGAGTTTCTGTAACTTTTAGAGTTGTAGATTCAGTTTTTTCGTGTGTAATCCTGGTCCCGTCGTTCCCGTCTCATCCCCAGCTAGACTCCCTCGCGCTCCCCGCTCAGAATTGGCGGGAGCCTGTTGCTGGGATGGATCGCAGGCTGTGATTGGCCAGCGGCGTACAACGTCAGATCAACGCAGAGTCACGTTATTGGCTGTCACGACTGGTGCTGCCTCTCCACACGTACCAAGGGCTGTGATTTAACAGTGAGTGCGATTCTCGAGTAGGATTGGTCAGATGAAAATAACAAGTCACAAAGTTATTCCGTGGAACTAACAGCTTTGGCTAGGTATTTTGAGGGTTTCTGTTTAGCGAAACACACTTTAAGAATTTAAATGTTTTTCTAAATAAAACTGTTGAGATGTAATGATTCCATGTTTTTGCAGAAGCTTGAAATGTTTAAAGATTGATATTTGAACTGAACTGAGTACAAACGTCAGTAATTCCGCAAAAGATCTTGAATTATCTTGAGATAAAATTCCAAAGTACGAAAATATATTCAAGTTTCTGCCAAAAATAACAGATAGGTGTCATATGTTTTTCATTGCCACAAGGCAGGGAAACTGGTAAATATTCTAGTCACAAGCGCTGAGACCACACCTTGTGATGGGGCTTGTAGTCTTCAACAGTTACAACTTCCGTCCGCTACGTGCAAAACAGGCCGCGTTTAGAACTACATTTCCCACAACGTATCAGAACGCTTCCAGTCTTCCACGTGATCGCCAGGATTCGCAGACTGCAGACGGACGTATCCCCATCAAACTATTTAACGGTGCACGGGTATTGTATCGTCAGGAATATATCTGTGTTTCTTTTAGCACTGAAAACATCAGTAAATCAGTTCAGAGAGGGAAAAGTTCATTTGCACCAGAAACATCAAACATTTTCCACCTTTTCTCAAAATTGAGAAATGACAGATCGAACGAACAACTTCCCTCCTCTGCCGAAGTTTCTTCGCATAAAGCCATGTTTTTACCAGAATGTGGACGAGGAAATTCCGCAACCCCACCGCCATCTTGTGCGTCGTATTTACAATCTTTGGATGTGGCTGATAGTTCCTTCAACTTCATGGCCTTTTTCTTCATTTTCTTCCTGCAATGTGTTCTCGCCTTCTTCCAGTGTCTTGGAATATCAGGTTGGGGTGCATGTGGTTGGCTTGCCACAGTGATGTTTTTCAACACAAATGTAATCTCGGCTATATTCATGCTCATCTGTACTCTGCTCTTTACCGTAGTTACGGTTCTCATGGTGCTTGTCCTCATCAAGGTCCATCGACTATATCGTGGTGGAGGAGGCAGTTTTCAGCGGGCACAGGAAGAATGGAGCACGGGTGCATGGAAGAACCCCACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000030_04730959_04734987.mRNA True 2002 mRNA 0.43 6 4729701 4734987

Neighbor

gene id symbol gene type direction distance location
CI01000030_04708812_04716224 NA coding upstream 11998 4708577 ~ 4717703 (+)
CI01000030_04588910_04589122 NA coding upstream 140524 4587884 ~ 4589177 (+)
CI01000030_04575377_04586894 GNA15.1 coding upstream 142774 4575074 ~ 4586927 (+)
CI01000030_04552559_04571086 NA coding upstream 156700 4549946 ~ 4573001 (+)
CI01000030_04454078_04461414 NA coding upstream 267587 4451936 ~ 4462114 (+)
CI01000030_04794796_04802874 DDX59 coding downstream 59655 4794642 ~ 4802932 (+)
CI01000030_04804199_04820916 KIF14 coding downstream 69212 4804199 ~ 4821266 (+)
CI01000030_04822608_04834394 NA coding downstream 87621 4822608 ~ 4834400 (+)
CI01000030_04956344_04956706 NA coding downstream 221319 4956306 ~ 4957238 (+)
CI01000030_04965586_04966361 NA coding downstream 229818 4964805 ~ 4966394 (+)
G159841 NA non-coding upstream 48789 4678164 ~ 4680912 (+)
G159863 NA non-coding upstream 96241 4633188 ~ 4633460 (+)
G159858 NA non-coding upstream 112150 4617343 ~ 4617551 (+)
G159816 NA non-coding upstream 212320 4516778 ~ 4517381 (+)
G159748 NA non-coding upstream 400169 4329277 ~ 4329532 (+)
G159836 NA non-coding downstream 2815 4737802 ~ 4738938 (+)
G159887 NA non-coding downstream 10043 4745030 ~ 4745324 (+)
G159888 NA non-coding downstream 11664 4746651 ~ 4746935 (+)
G159889 NA non-coding downstream 15654 4750641 ~ 4751246 (+)
G159892 NA non-coding downstream 35598 4770585 ~ 4784656 (+)
G159685 NA other upstream 241175 4431800 ~ 4488526 (+)
CI01000030_03018776_03042194 FGF22 other upstream 1685928 3018776 ~ 3043773 (+)
G158416 NA other upstream 2115408 2595876 ~ 2614293 (+)
CI01000030_02277208_02282376 TM6SF2 other upstream 2447331 2277208 ~ 2282743 (+)
CI01000030_07200104_07202258 GCGA other downstream 2464948 7200104 ~ 7202485 (+)
CI01000030_07868597_07886123 NA other downstream 3119098 7868292 ~ 7886228 (+)
G162088 NA other downstream 3502978 8237965 ~ 8239604 (+)
G161986 NA other downstream 3809595 8544582 ~ 8548325 (+)
G162137 NA other downstream 3833023 8568010 ~ 8571726 (+)

Expression


Co-expression Network