XLOC_008829 (CR381579.3)



Basic Information


Item Value
gene id XLOC_008829
gene name CR381579.3
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 46695492 ~ 46745189 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00017495
CATTctgaaacgttgctgctctgtctcagtgtggatgggggaaaatagAGACATCtggaaacggaggcggggctgccgagattcgctacctgattgaggcttttgtgtcattgcgtatccttcccttattcgtcaagcccctaccACATGAcaataacacatggctttaatgctacccgaagacagtactgtaaacaacaacatgggcacagaaatggaagcgttgtttgcactattgtctgttttaggcgccattgtgcagttattcgttacgtttagtaacaactcgacctcgtcgtctgtccacaaaatacctctcttgctttctttgccatcacgttcattgttcaaccggcgtttgttgactaaaaaTAACCAAATGCCAAGcaagacacatgcttcctgtttatactggaacgtgcatgcccagagtgcgcgaatggtcacgtgatatacggttttgtggcgtagtgtggacggagatatgttcagaaacgctagtgtggacgcggatcgtttttgatctaaaacgccgttttaaaactaaaacgcactagtgtaaacggggcctgagataCATAGAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097671

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00017495 True 584 lncRNA 0.46 2 46695492 46745189

Neighbor


gene id symbol gene type direction distance location
XLOC_008828 NA coding upstream 33097 46661849 ~ 46662395 (+)
XLOC_008827 CABZ01044048.1 coding upstream 70772 46605482 ~ 46624720 (+)
XLOC_008825 NA coding upstream 96628 46385774 ~ 46598864 (+)
XLOC_008826 CABZ01044047.1 coding upstream 99912 46595466 ~ 46595580 (+)
XLOC_008824 NA coding upstream 316921 46367543 ~ 46378571 (+)
XLOC_008830 NA coding downstream 54280 46799469 ~ 46801184 (+)
XLOC_008831 CR381579.4 coding downstream 56152 46801341 ~ 46806280 (+)
XLOC_008832 zgc:153039 coding downstream 108063 46853252 ~ 46913075 (+)
XLOC_008833 ecel1 coding downstream 263118 47008307 ~ 47075260 (+)
XLOC_008834 cep57 coding downstream 337974 47083163 ~ 47088424 (+)
XLOC_008463 BX663520.1 misc upstream 25443210 21252191 ~ 21252282 (+)
XLOC_008820 NA non-coding upstream 377850 46315519 ~ 46317642 (+)
XLOC_008836 NA non-coding downstream 550855 47296044 ~ 47297545 (+)
XLOC_008837 CABZ01088337.1 non-coding downstream 577671 47322860 ~ 47322976 (+)
XLOC_008846 CABZ01087560.1 non-coding downstream 864133 47609322 ~ 47614730 (+)

Expression



Co-expression Network